Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC007114.2-201ENST00000576014 4281 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA4P51532 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC9.64□□□□□ -0.87
SMARCA4P51532 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA4P51532 AC068538.1-201ENST00000376856 336 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 SNORD56.6-201ENST00000384569 71 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 RPS4XP9-201ENST00000405151 780 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA4P51532 OR2AM1P-201ENST00000422137 422 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
SMARCA4P51532 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC9.64□□□□□ -0.87
SMARCA4P51532 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC9.64□□□□□ -0.87
SMARCA4P51532 KNOP1P3-201ENST00000446933 426 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 RN7SL205P-201ENST00000490174 284 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 AC109464.1-201ENST00000511091 819 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 RN7SL52P-201ENST00000584271 284 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA4P51532 AC009597.2-201ENST00000604659 592 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 AC083809.1-201ENST00000615051 472 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 RN7SL722P-201ENST00000617780 284 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 RN7SL565P-201ENST00000618246 284 ntBASIC9.64□□□□□ -0.87
SMARCA4P51532 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA4P51532 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA4P51532 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA4P51532 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
SMARCA4P51532 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC9.63□□□□□ -0.87
SMARCA4P51532 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA4P51532 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC9.63□□□□□ -0.87
SMARCA4P51532 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA4P51532 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA4P51532 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA4P51532 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA4P51532 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA4P51532 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA4P51532 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA4P51532 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA4P51532 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
SMARCA4P51532 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA4P51532 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA4P51532 RPS17P17-201ENST00000419392 409 ntBASIC9.63□□□□□ -0.87
SMARCA4P51532 RNGTTP1-201ENST00000420965 728 ntBASIC9.63□□□□□ -0.87
SMARCA4P51532 CRIP1P1-201ENST00000427567 185 ntBASIC9.63□□□□□ -0.87
SMARCA4P51532 RPL12P17-201ENST00000432393 498 ntBASIC9.63□□□□□ -0.87
SMARCA4P51532 RPL36AP15-201ENST00000444514 266 ntBASIC9.63□□□□□ -0.87
SMARCA4P51532 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC9.63□□□□□ -0.87
SMARCA4P51532 UBE2FP2-201ENST00000566646 462 ntBASIC9.63□□□□□ -0.87
SMARCA4P51532 MIR4270-201ENST00000581799 70 ntBASIC9.63□□□□□ -0.87
SMARCA4P51532 MEMO1P5-201ENST00000604810 406 ntBASIC9.63□□□□□ -0.87
SMARCA4P51532 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC9.63□□□□□ -0.87
SMARCA4P51532 EEF1A1P33-201ENST00000554413 1362 ntBASIC9.63□□□□□ -0.87
SMARCA4P51532 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA4P51532 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMARCA4P51532 AC009962.1-201ENST00000567327 3813 ntBASIC9.62□□□□□ -0.87
SMARCA4P51532 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMARCA4P51532 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC9.62□□□□□ -0.87
SMARCA4P51532 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMARCA4P51532 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC9.62□□□□□ -0.87
SMARCA4P51532 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMARCA4P51532 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
SMARCA4P51532 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC9.62□□□□□ -0.87
SMARCA4P51532 AC093414.1-201ENST00000434712 514 ntBASIC9.62□□□□□ -0.87
SMARCA4P51532 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SMARCA4P51532 EDDM3DP-201ENST00000554692 434 ntBASIC9.62□□□□□ -0.87
SMARCA4P51532 AL683813.2-201ENST00000605245 502 ntBASIC9.62□□□□□ -0.87
SMARCA4P51532 AL133481.2-203ENST00000607558 139 ntBASIC9.62□□□□□ -0.87
SMARCA4P51532 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SMARCA4P51532 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SMARCA4P51532 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMARCA4P51532 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC9.62□□□□□ -0.87
SMARCA4P51532 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMARCA4P51532 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA4P51532 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SMARCA4P51532 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC9.61□□□□□ -0.87
SMARCA4P51532 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA4P51532 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
SMARCA4P51532 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA4P51532 RNA5SP455-201ENST00000365190 119 ntBASIC9.61□□□□□ -0.87
SMARCA4P51532 AC092754.1-201ENST00000472975 479 ntBASIC9.61□□□□□ -0.87
SMARCA4P51532 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
SMARCA4P51532 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC9.61□□□□□ -0.87
SMARCA4P51532 PDCD6IPP2-207ENST00000566321 1069 ntBASIC9.61□□□□□ -0.87
SMARCA4P51532 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA4P51532 CAST-222ENST00000508579 1758 ntTSL 2 BASIC9.61□□□□□ -0.87
SMARCA4P51532 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC9.61□□□□□ -0.87
SMARCA4P51532 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
SMARCA4P51532 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA4P51532 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA4P51532 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA4P51532 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC9.61□□□□□ -0.87
SMARCA4P51532 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA4P51532 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC9.61□□□□□ -0.87
SMARCA4P51532 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SMARCA4P51532 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
SMARCA4P51532 SNORA70H-201ENST00000383910 135 ntBASIC9.6□□□□□ -0.87
SMARCA4P51532 SNORA70J-201ENST00000384182 135 ntBASIC9.6□□□□□ -0.87
SMARCA4P51532 AC008171.1-201ENST00000395058 200 ntBASIC9.6□□□□□ -0.87
SMARCA4P51532 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SMARCA4P51532 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
SMARCA4P51532 TPT1P12-201ENST00000448968 492 ntBASIC9.6□□□□□ -0.87
SMARCA4P51532 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms