Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CX3CR1P49238 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.98□□□□□ -1.61
CX3CR1P49238 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.98□□□□□ -1.61
CX3CR1P49238 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.98□□□□□ -1.61
CX3CR1P49238 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.98□□□□□ -1.61
CX3CR1P49238 GAPDHP48-201ENST00000436626 961 ntBASIC4.98□□□□□ -1.61
CX3CR1P49238 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.98□□□□□ -1.61
CX3CR1P49238 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.98□□□□□ -1.61
CX3CR1P49238 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.98□□□□□ -1.61
CX3CR1P49238 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.98□□□□□ -1.61
CX3CR1P49238 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.98□□□□□ -1.61
CX3CR1P49238 RFPL4AP3-201ENST00000515267 345 ntBASIC4.98□□□□□ -1.61
CX3CR1P49238 AC011853.1-201ENST00000518911 454 ntBASIC4.98□□□□□ -1.61
CX3CR1P49238 HMGN2P36-201ENST00000529541 409 ntBASIC4.98□□□□□ -1.61
CX3CR1P49238 AC006512.2-201ENST00000543250 486 ntBASIC4.98□□□□□ -1.61
CX3CR1P49238 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.98□□□□□ -1.61
CX3CR1P49238 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.98□□□□□ -1.61
CX3CR1P49238 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.98□□□□□ -1.61
CX3CR1P49238 CR382285.2-201ENST00000624662 1495 ntBASIC4.98□□□□□ -1.61
CX3CR1P49238 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.98□□□□□ -1.61
CX3CR1P49238 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CR1P49238 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
CX3CR1P49238 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.98□□□□□ -1.61
CX3CR1P49238 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
CX3CR1P49238 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
CX3CR1P49238 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CR1P49238 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
CX3CR1P49238 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.97□□□□□ -1.61
CX3CR1P49238 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.97□□□□□ -1.61
CX3CR1P49238 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CX3CR1P49238 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 AP005435.3-201ENST00000531260 3198 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CX3CR1P49238 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.97□□□□□ -1.61
CX3CR1P49238 OR56A4-201ENST00000330728 1209 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 TMSB4XP2-201ENST00000335179 210 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 AL121886.1-201ENST00000358609 435 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.97□□□□□ -1.61
CX3CR1P49238 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CX3CR1P49238 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
CX3CR1P49238 AC096921.1-201ENST00000411661 375 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 AK4P4-201ENST00000419465 646 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.97□□□□□ -1.61
CX3CR1P49238 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.97□□□□□ -1.61
CX3CR1P49238 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.97□□□□□ -1.61
CX3CR1P49238 NDUFS5P5-201ENST00000437256 321 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.97□□□□□ -1.61
CX3CR1P49238 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.97□□□□□ -1.61
CX3CR1P49238 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.97□□□□□ -1.61
CX3CR1P49238 TRBV8-1-201ENST00000481590 279 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.97□□□□□ -1.61
CX3CR1P49238 RN7SL570P-201ENST00000484405 292 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 RPL32P33-201ENST00000487023 394 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.97□□□□□ -1.61
CX3CR1P49238 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.97□□□□□ -1.61
CX3CR1P49238 OR5H7P-201ENST00000514084 930 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 Y_RNA.667-201ENST00000516212 107 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 RNA5SP438-201ENST00000516561 112 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.97□□□□□ -1.61
CX3CR1P49238 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.97□□□□□ -1.61
CX3CR1P49238 AC027369.2-201ENST00000528030 440 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.97□□□□□ -1.61
CX3CR1P49238 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.97□□□□□ -1.61
CX3CR1P49238 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.97□□□□□ -1.61
CX3CR1P49238 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.97□□□□□ -1.61
CX3CR1P49238 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.97□□□□□ -1.61
CX3CR1P49238 AGGF1P7-201ENST00000562369 913 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.97□□□□□ -1.61
CX3CR1P49238 LINC00556-201ENST00000569603 412 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
CX3CR1P49238 DHFRP1-201ENST00000579682 559 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.97□□□□□ -1.61
CX3CR1P49238 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.97□□□□□ -1.61
CX3CR1P49238 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.97□□□□□ -1.61
CX3CR1P49238 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 AC244100.4-201ENST00000617747 388 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 AL591926.1-201ENST00000620542 217 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.97□□□□□ -1.61
CX3CR1P49238 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CX3CR1P49238 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
CX3CR1P49238 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
CX3CR1P49238 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 MTCO1P7-201ENST00000419523 1542 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 AC027279.1-201ENST00000568885 4284 ntBASIC4.97□□□□□ -1.61
CX3CR1P49238 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CR1P49238 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.96□□□□□ -1.61
CX3CR1P49238 AC104964.3-201ENST00000606115 2860 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms