Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 DHFRP1-201ENST00000579682 559 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 AC023575.1-201ENST00000580510 358 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 MIR132-201ENST00000591554 101 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 AC008785.1-201ENST00000624475 456 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.36□□□□□ -1.87
PKHD1P08F94 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC3.36□□□□□ -1.87
PKHD1P08F94 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PKHD1P08F94 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PKHD1P08F94 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC3.36□□□□□ -1.87
PKHD1P08F94 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC3.36□□□□□ -1.87
PKHD1P08F94 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.36□□□□□ -1.87
PKHD1P08F94 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC3.36□□□□□ -1.87
PKHD1P08F94 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.36□□□□□ -1.87
PKHD1P08F94 RPL7P57-201ENST00000423238 740 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC3.36□□□□□ -1.87
PKHD1P08F94 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.36□□□□□ -1.87
PKHD1P08F94 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.36□□□□□ -1.87
PKHD1P08F94 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.36□□□□□ -1.87
PKHD1P08F94 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.36□□□□□ -1.87
PKHD1P08F94 CDC42EP3P1-201ENST00000601004 764 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 AC027334.1-201ENST00000603257 310 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 AC011944.2-201ENST00000624440 683 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.36□□□□□ -1.87
PKHD1P08F94 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC3.36□□□□□ -1.87
PKHD1P08F94 AC006511.3-201ENST00000624929 1783 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC3.36□□□□□ -1.87
PKHD1P08F94 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PKHD1P08F94 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.36□□□□□ -1.87
PKHD1P08F94 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC3.36□□□□□ -1.87
PKHD1P08F94 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 SNORD113.2-201ENST00000364166 89 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 CHEK2P3-201ENST00000416118 248 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 AC083829.1-201ENST00000503756 657 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 SCARNA22-201ENST00000503991 125 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.36□□□□□ -1.87
PKHD1P08F94 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.36□□□□□ -1.87
PKHD1P08F94 AL163952.1-202ENST00000569625 600 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC3.36□□□□□ -1.87
PKHD1P08F94 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 COL6A4P1-202ENST00000487147 4317 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC3.36□□□□□ -1.87
PKHD1P08F94 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PKHD1P08F94 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 RNA5SP447-201ENST00000363749 119 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 SNORA70F-201ENST00000384142 135 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 OR2B7P-201ENST00000429302 934 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 RPL7P32-201ENST00000457119 744 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 PPIAP21-201ENST00000464473 501 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC3.35□□□□□ -1.87
PKHD1P08F94 RNA5SP143-201ENST00000516936 115 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.35□□□□□ -1.87
PKHD1P08F94 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC3.35□□□□□ -1.87
PKHD1P08F94 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.35□□□□□ -1.87
PKHD1P08F94 AC022916.3-201ENST00000592961 742 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.35□□□□□ -1.87
PKHD1P08F94 CASC22-202ENST00000628396 802 ntTSL 5 BASIC3.35□□□□□ -1.87
PKHD1P08F94 AC073869.8-201ENST00000641806 335 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 OFD1P8Y-201ENST00000449148 1433 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC3.35□□□□□ -1.87
PKHD1P08F94 AC140479.2-201ENST00000421567 3130 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC3.35□□□□□ -1.87
PKHD1P08F94 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC3.35□□□□□ -1.87
PKHD1P08F94 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PKHD1P08F94 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC3.35□□□□□ -1.87
PKHD1P08F94 SP1-202ENST00000426431 7603 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 SNORA71.3-201ENST00000362582 128 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 AL592293.2-201ENST00000422292 996 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC3.35□□□□□ -1.87
PKHD1P08F94 TXNP5-201ENST00000441043 315 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.35□□□□□ -1.87
PKHD1P08F94 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms