Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AP001885.1-201ENST00000621658 558 ntBASIC7.19□□□□□ -1.26
COL5A2P05997 AC013268.3-201ENST00000262716 2324 ntBASIC7.19□□□□□ -1.26
COL5A2P05997 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL5A2P05997 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL5A2P05997 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.19□□□□□ -1.26
COL5A2P05997 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL5A2P05997 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL5A2P05997 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL5A2P05997 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.19□□□□□ -1.26
COL5A2P05997 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL5A2P05997 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.19□□□□□ -1.26
COL5A2P05997 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 ATP6V1G1P7-201ENST00000415853 349 ntBASIC7.18□□□□□ -1.26
COL5A2P05997 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.18□□□□□ -1.26
COL5A2P05997 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC7.18□□□□□ -1.26
COL5A2P05997 AC073410.1-201ENST00000435125 589 ntBASIC7.18□□□□□ -1.26
COL5A2P05997 RPS4XP20-201ENST00000505751 772 ntBASIC7.18□□□□□ -1.26
COL5A2P05997 AC005341.1-201ENST00000571086 708 ntBASIC7.18□□□□□ -1.26
COL5A2P05997 AC008745.1-201ENST00000604064 271 ntBASIC7.18□□□□□ -1.26
COL5A2P05997 AL627230.1-201ENST00000613077 211 ntBASIC7.18□□□□□ -1.26
COL5A2P05997 AL591926.8-201ENST00000616876 211 ntBASIC7.18□□□□□ -1.26
COL5A2P05997 AC099494.2-201ENST00000623371 978 ntBASIC7.18□□□□□ -1.26
COL5A2P05997 AC091905.4-201ENST00000623432 202 ntBASIC7.18□□□□□ -1.26
COL5A2P05997 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
COL5A2P05997 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC7.18□□□□□ -1.26
COL5A2P05997 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.18□□□□□ -1.26
COL5A2P05997 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC7.18□□□□□ -1.26
COL5A2P05997 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.18□□□□□ -1.26
COL5A2P05997 AL078621.3-201ENST00000623707 2042 ntBASIC7.18□□□□□ -1.26
COL5A2P05997 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.18□□□□□ -1.26
COL5A2P05997 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
COL5A2P05997 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL5A2P05997 AC022034.1-201ENST00000512867 2156 ntBASIC7.18□□□□□ -1.26
COL5A2P05997 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL5A2P05997 RN7SKP95-201ENST00000362860 303 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL5A2P05997 AL078599.1-201ENST00000402075 293 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 COX6B1P1-201ENST00000415962 213 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.17□□□□□ -1.26
COL5A2P05997 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC7.17□□□□□ -1.26
COL5A2P05997 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL5A2P05997 TPT1P13-201ENST00000449760 499 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 AC104634.1-201ENST00000452720 462 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 AC096741.1-201ENST00000472250 846 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 RN7SL459P-201ENST00000481078 302 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 IGHVII-44-2-201ENST00000517728 250 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC7.17□□□□□ -1.26
COL5A2P05997 H3F3BP2-201ENST00000583907 357 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 AL133406.3-201ENST00000606817 541 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL5A2P05997 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
COL5A2P05997 AP000866.6-201ENST00000638898 3579 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 CASC19-221ENST00000641309 1382 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.17□□□□□ -1.26
COL5A2P05997 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL5A2P05997 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.17□□□□□ -1.26
COL5A2P05997 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL5A2P05997 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL5A2P05997 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL5A2P05997 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.17□□□□□ -1.26
COL5A2P05997 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL5A2P05997 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.17□□□□□ -1.26
COL5A2P05997 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL5A2P05997 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.17□□□□□ -1.26
COL5A2P05997 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.17□□□□□ -1.26
COL5A2P05997 EI24P4-201ENST00000423683 1078 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.17□□□□□ -1.26
COL5A2P05997 AC091390.1-201ENST00000433904 331 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC7.17□□□□□ -1.26
COL5A2P05997 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC7.17□□□□□ -1.26
COL5A2P05997 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC7.17□□□□□ -1.26
COL5A2P05997 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC7.17□□□□□ -1.26
COL5A2P05997 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL5A2P05997 AC005000.1-201ENST00000536192 288 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.17□□□□□ -1.26
COL5A2P05997 MIR4691-201ENST00000583764 85 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 AP000769.2-201ENST00000602344 396 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 AL513327.3-201ENST00000602618 469 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 MIR7641-1-201ENST00000627518 61 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
COL5A2P05997 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL5A2P05997 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL5A2P05997 EPS15P1-202ENST00000459691 2071 ntBASIC7.17□□□□□ -1.26
COL5A2P05997 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
COL5A2P05997 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms