Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 AL022322.2-201ENST00000624072 20397 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 AC104623.2-202ENST00000623477 4002 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 RNA5SP477-201ENST00000362639 119 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 RNA5SP241-201ENST00000391326 114 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 RN7SKP240-201ENST00000410583 375 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 AC066692.1-201ENST00000421721 457 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 NPM1P25-201ENST00000429734 854 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 GEMIN2P1-201ENST00000454246 752 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 TAAR4P-201ENST00000454843 1039 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 AC099521.1-201ENST00000482557 334 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 DUTP1-201ENST00000493631 470 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 ENPP7P11-201ENST00000505915 627 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 AC074255.1-201ENST00000511259 501 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 SCARNA18.1-201ENST00000516330 83 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 RNA5SP438-201ENST00000516561 112 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 AC068305.2-201ENST00000550567 1205 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 AC024884.1-201ENST00000620583 399 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 OR8A1-204ENST00000642111 1145 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 AC011755.1-201ENST00000623763 2049 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 AP001157.1-201ENST00000550837 2339 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 MAPK10-338ENST00000641647 3362 ntBASIC5.02□□□□□ -1.61
HLA-DPB1P04440 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 OR9K1P-201ENST00000326513 941 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 RNA5SP326-201ENST00000363209 110 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 SUGT1P2-201ENST00000379452 992 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AC010740.1-201ENST00000417035 684 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 BX284632.2-201ENST00000421091 399 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 RIMKLBP2-201ENST00000424737 654 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 NDUFS5P5-201ENST00000437256 321 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 EIF5AP4-201ENST00000441206 465 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AL512605.1-202ENST00000441919 381 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AL359955.2-201ENST00000445380 353 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 GAPDHP14-201ENST00000450472 937 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 OR52E3P-201ENST00000452083 936 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 HLA-DPA3-207ENST00000454398 229 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 RN7SL57P-201ENST00000493687 290 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AC006499.4-201ENST00000510947 694 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 PMS2P3-207ENST00000529061 717 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 PCNAP4-201ENST00000532690 730 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AC006530.1-201ENST00000555980 571 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms