Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.13□□□□□ -1.43
VTNP04004 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.12□□□□□ -1.43
VTNP04004 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
VTNP04004 AL359955.1-201ENST00000455242 3275 ntBASIC6.12□□□□□ -1.43
VTNP04004 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.12□□□□□ -1.43
VTNP04004 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.12□□□□□ -1.43
VTNP04004 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VTNP04004 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
VTNP04004 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
VTNP04004 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
VTNP04004 MIR551A-201ENST00000385042 96 ntBASIC6.12□□□□□ -1.43
VTNP04004 AL009179.1-201ENST00000406085 265 ntBASIC6.12□□□□□ -1.43
VTNP04004 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.12□□□□□ -1.43
VTNP04004 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.12□□□□□ -1.43
VTNP04004 NPM1P36-201ENST00000415681 835 ntBASIC6.12□□□□□ -1.43
VTNP04004 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.12□□□□□ -1.43
VTNP04004 AL390879.1-201ENST00000439143 386 ntBASIC6.12□□□□□ -1.43
VTNP04004 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.12□□□□□ -1.43
VTNP04004 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.12□□□□□ -1.43
VTNP04004 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VTNP04004 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.12□□□□□ -1.43
VTNP04004 PGAM1P13-201ENST00000507497 754 ntBASIC6.12□□□□□ -1.43
VTNP04004 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.12□□□□□ -1.43
VTNP04004 AC078878.1-201ENST00000539832 958 ntBASIC6.12□□□□□ -1.43
VTNP04004 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.12□□□□□ -1.43
VTNP04004 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VTNP04004 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.12□□□□□ -1.43
VTNP04004 AL512329.2-201ENST00000607350 548 ntBASIC6.12□□□□□ -1.43
VTNP04004 AL021707.7-201ENST00000607991 416 ntBASIC6.12□□□□□ -1.43
VTNP04004 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.12□□□□□ -1.43
VTNP04004 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.12□□□□□ -1.43
VTNP04004 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.12□□□□□ -1.43
VTNP04004 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VTNP04004 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VTNP04004 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VTNP04004 AC144833.1-201ENST00000567953 4089 ntBASIC6.12□□□□□ -1.43
VTNP04004 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
VTNP04004 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VTNP04004 LINC01963-201ENST00000562038 3148 ntBASIC6.12□□□□□ -1.43
VTNP04004 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VTNP04004 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
VTNP04004 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VTNP04004 AC073365.1-203ENST00000641055 1992 ntBASIC6.11□□□□□ -1.43
VTNP04004 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VTNP04004 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
VTNP04004 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VTNP04004 AL592429.1-201ENST00000403909 1473 ntBASIC6.11□□□□□ -1.43
VTNP04004 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
VTNP04004 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
VTNP04004 AC005042.1-201ENST00000393397 800 ntBASIC6.11□□□□□ -1.43
VTNP04004 AL390774.1-201ENST00000411924 246 ntBASIC6.11□□□□□ -1.43
VTNP04004 AL627308.1-201ENST00000435693 821 ntBASIC6.11□□□□□ -1.43
VTNP04004 AC092106.1-201ENST00000444291 373 ntBASIC6.11□□□□□ -1.43
VTNP04004 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.11□□□□□ -1.43
VTNP04004 RN7SL30P-201ENST00000488416 306 ntBASIC6.11□□□□□ -1.43
VTNP04004 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.11□□□□□ -1.43
VTNP04004 RPEP1-201ENST00000504507 658 ntBASIC6.11□□□□□ -1.43
VTNP04004 HIGD1AP14-201ENST00000507617 282 ntBASIC6.11□□□□□ -1.43
VTNP04004 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.11□□□□□ -1.43
VTNP04004 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VTNP04004 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.11□□□□□ -1.43
VTNP04004 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.11□□□□□ -1.43
VTNP04004 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.11□□□□□ -1.43
VTNP04004 NANOGP3-201ENST00000605855 286 ntBASIC6.11□□□□□ -1.43
VTNP04004 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.11□□□□□ -1.43
VTNP04004 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.11□□□□□ -1.43
VTNP04004 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.11□□□□□ -1.43
VTNP04004 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.11□□□□□ -1.43
VTNP04004 AC068769.1-201ENST00000474767 2426 ntBASIC6.11□□□□□ -1.43
VTNP04004 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VTNP04004 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
VTNP04004 AC239868.2-201ENST00000564237 4527 ntBASIC6.11□□□□□ -1.43
VTNP04004 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.11□□□□□ -1.43
VTNP04004 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
VTNP04004 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 MT-RNR2-201ENST00000387347 1559 ntBASIC6.1□□□□□ -1.43
VTNP04004 AC110716.2-201ENST00000563865 3945 ntBASIC6.1□□□□□ -1.43
VTNP04004 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 AC104964.3-201ENST00000606115 2860 ntBASIC6.1□□□□□ -1.43
VTNP04004 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
VTNP04004 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
VTNP04004 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 RNA5SP335-201ENST00000363817 110 ntBASIC6.1□□□□□ -1.43
VTNP04004 RNU1-59P-201ENST00000364829 162 ntBASIC6.1□□□□□ -1.43
VTNP04004 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.1□□□□□ -1.43
VTNP04004 RNU4-34P-201ENST00000410431 124 ntBASIC6.1□□□□□ -1.43
VTNP04004 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.1□□□□□ -1.43
VTNP04004 NANOGP4-201ENST00000427230 913 ntBASIC6.1□□□□□ -1.43
VTNP04004 TMEM183AP1-205ENST00000432739 290 ntBASIC6.1□□□□□ -1.43
VTNP04004 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.1□□□□□ -1.43
VTNP04004 RN7SL727P-201ENST00000482164 296 ntBASIC6.1□□□□□ -1.43
VTNP04004 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.1□□□□□ -1.43
VTNP04004 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.1□□□□□ -1.43
VTNP04004 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms