Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 NF1P12-201ENST00000549593 583 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC8.23□□□□□ -1.09
HOXA2O43364 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC8.23□□□□□ -1.09
HOXA2O43364 AC136618.2-201ENST00000575091 400 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC8.23□□□□□ -1.09
HOXA2O43364 MIR1273F-201ENST00000580581 99 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 AL390058.1-201ENST00000603834 629 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 SUGT1P3-202ENST00000604259 383 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 AL035413.2-201ENST00000604801 525 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 AC004852.1-201ENST00000605206 154 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
HOXA2O43364 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 AC005332.6-201ENST00000613178 446 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 AC010205.1-201ENST00000616668 449 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 AC138305.3-201ENST00000624988 240 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 AC243725.1-201ENST00000637164 436 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
HOXA2O43364 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 AC100871.1-201ENST00000507871 1456 ntBASIC8.23□□□□□ -1.09
HOXA2O43364 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC8.23□□□□□ -1.09
HOXA2O43364 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
HOXA2O43364 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
HOXA2O43364 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
HOXA2O43364 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.23□□□□□ -1.09
HOXA2O43364 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 CHODL-206ENST00000400135 2136 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC8.23□□□□□ -1.09
HOXA2O43364 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC8.23□□□□□ -1.09
HOXA2O43364 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXA2O43364 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC8.22□□□□□ -1.09
HOXA2O43364 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC8.22□□□□□ -1.09
HOXA2O43364 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HOXA2O43364 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
HOXA2O43364 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC8.22□□□□□ -1.09
HOXA2O43364 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
HOXA2O43364 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HOXA2O43364 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HOXA2O43364 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HOXA2O43364 AC009148.1-201ENST00000570148 2693 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 AC061975.7-201ENST00000592016 2692 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
HOXA2O43364 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
HOXA2O43364 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HOXA2O43364 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HOXA2O43364 CDY11P-201ENST00000447168 1651 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 NF1P2-201ENST00000556855 2505 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HOXA2O43364 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HOXA2O43364 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HOXA2O43364 RNA5SP396-201ENST00000364834 120 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC8.22□□□□□ -1.09
HOXA2O43364 RNU6-452P-201ENST00000384406 107 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
HOXA2O43364 ZNF37CP-201ENST00000406795 241 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 AMD1P2-201ENST00000412936 992 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HOXA2O43364 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC8.22□□□□□ -1.09
HOXA2O43364 AC231533.2-201ENST00000419045 978 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 CHCHD3P1-201ENST00000425516 676 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC8.22□□□□□ -1.09
HOXA2O43364 AP001324.1-201ENST00000428553 399 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 FTO-202ENST00000431610 707 ntTSL 3 BASIC8.22□□□□□ -1.09
HOXA2O43364 AL358934.1-201ENST00000432346 324 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 FTH1P16-201ENST00000435241 552 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 HMGB3P9-201ENST00000441799 583 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8.22□□□□□ -1.09
HOXA2O43364 RN7SL706P-201ENST00000460079 292 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 RPS4XP19-201ENST00000460237 736 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 TDGF1P6-201ENST00000463873 448 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 AC023598.1-201ENST00000472521 361 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 AC096576.1-201ENST00000489014 359 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC8.22□□□□□ -1.09
HOXA2O43364 AC026412.2-201ENST00000512270 1075 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 RNY4P37-201ENST00000516225 96 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 AP005902.2-201ENST00000518393 307 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 SNX18P27-201ENST00000523611 779 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 HSPA8P13-201ENST00000523715 472 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC8.22□□□□□ -1.09
HOXA2O43364 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC8.22□□□□□ -1.09
HOXA2O43364 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC8.22□□□□□ -1.09
HOXA2O43364 AC008127.2-201ENST00000549925 1075 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC8.22□□□□□ -1.09
HOXA2O43364 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC8.22□□□□□ -1.09
HOXA2O43364 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC8.22□□□□□ -1.09
HOXA2O43364 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC8.22□□□□□ -1.09
HOXA2O43364 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC8.22□□□□□ -1.09
HOXA2O43364 AC005518.2-201ENST00000603254 282 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC8.22□□□□□ -1.09
HOXA2O43364 AC108451.2-201ENST00000603875 538 ntBASIC8.22□□□□□ -1.09
HOXA2O43364 AC087283.1-201ENST00000604029 1074 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms