Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
NDUFA1O15239 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDUFA1O15239 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDUFA1O15239 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NDUFA1O15239 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC3.78□□□□□ -1.8
NDUFA1O15239 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 PDZK1P1-202ENST00000425209 1350 ntBASIC3.78□□□□□ -1.8
NDUFA1O15239 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC3.78□□□□□ -1.8
NDUFA1O15239 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
NDUFA1O15239 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC3.78□□□□□ -1.8
NDUFA1O15239 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NDUFA1O15239 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
NDUFA1O15239 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC3.78□□□□□ -1.8
NDUFA1O15239 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC3.78□□□□□ -1.8
NDUFA1O15239 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NDUFA1O15239 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 PPIAP9-201ENST00000403866 498 ntBASIC3.78□□□□□ -1.8
NDUFA1O15239 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.78□□□□□ -1.8
NDUFA1O15239 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC3.78□□□□□ -1.8
NDUFA1O15239 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC3.78□□□□□ -1.8
NDUFA1O15239 AC126120.1-201ENST00000431082 470 ntBASIC3.78□□□□□ -1.8
NDUFA1O15239 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC3.78□□□□□ -1.8
NDUFA1O15239 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC3.78□□□□□ -1.8
NDUFA1O15239 AC073909.1-201ENST00000447112 999 ntBASIC3.78□□□□□ -1.8
NDUFA1O15239 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC3.78□□□□□ -1.8
NDUFA1O15239 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC3.78□□□□□ -1.8
NDUFA1O15239 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC3.78□□□□□ -1.8
NDUFA1O15239 CSNK1A1P3-201ENST00000504105 330 ntBASIC3.78□□□□□ -1.8
NDUFA1O15239 AL158068.1-201ENST00000506116 616 ntBASIC3.78□□□□□ -1.8
NDUFA1O15239 AC021106.1-201ENST00000509020 1058 ntBASIC3.78□□□□□ -1.8
NDUFA1O15239 GUSBP9-201ENST00000510138 584 ntBASIC3.78□□□□□ -1.8
NDUFA1O15239 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 AP001000.1-201ENST00000526843 742 ntBASIC3.78□□□□□ -1.8
NDUFA1O15239 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC3.78□□□□□ -1.8
NDUFA1O15239 AC121758.1-202ENST00000556917 658 ntBASIC3.78□□□□□ -1.8
NDUFA1O15239 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC3.78□□□□□ -1.8
NDUFA1O15239 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC3.78□□□□□ -1.8
NDUFA1O15239 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC3.78□□□□□ -1.8
NDUFA1O15239 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC3.78□□□□□ -1.8
NDUFA1O15239 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC3.78□□□□□ -1.8
NDUFA1O15239 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC3.78□□□□□ -1.8
NDUFA1O15239 MIR4502-201ENST00000580432 81 ntBASIC3.78□□□□□ -1.8
NDUFA1O15239 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC3.78□□□□□ -1.8
NDUFA1O15239 AC011500.1-201ENST00000601963 469 ntBASIC3.78□□□□□ -1.8
NDUFA1O15239 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC3.78□□□□□ -1.8
NDUFA1O15239 AC092266.1-201ENST00000610958 165 ntBASIC3.78□□□□□ -1.8
NDUFA1O15239 uc_338.29-201ENST00000615099 168 ntBASIC3.78□□□□□ -1.8
NDUFA1O15239 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC3.78□□□□□ -1.8
NDUFA1O15239 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC3.78□□□□□ -1.8
NDUFA1O15239 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
NDUFA1O15239 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
NDUFA1O15239 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 THAP12P5-201ENST00000405864 2275 ntBASIC3.78□□□□□ -1.8
NDUFA1O15239 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC3.78□□□□□ -1.8
NDUFA1O15239 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDUFA1O15239 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC3.78□□□□□ -1.81
NDUFA1O15239 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC3.78□□□□□ -1.81
NDUFA1O15239 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.81
NDUFA1O15239 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.77□□□□□ -1.81
NDUFA1O15239 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC3.77□□□□□ -1.81
NDUFA1O15239 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NDUFA1O15239 AC100757.1-201ENST00000616872 1835 ntBASIC3.77□□□□□ -1.81
NDUFA1O15239 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NDUFA1O15239 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC3.77□□□□□ -1.81
NDUFA1O15239 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
NDUFA1O15239 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
NDUFA1O15239 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
NDUFA1O15239 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC3.77□□□□□ -1.81
NDUFA1O15239 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NDUFA1O15239 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
NDUFA1O15239 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC3.77□□□□□ -1.81
NDUFA1O15239 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NDUFA1O15239 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NDUFA1O15239 RNU6-316P-201ENST00000391027 107 ntBASIC3.77□□□□□ -1.81
NDUFA1O15239 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NDUFA1O15239 GCNT1P4-201ENST00000404096 329 ntBASIC3.77□□□□□ -1.81
NDUFA1O15239 RN7SKP86-201ENST00000410454 332 ntBASIC3.77□□□□□ -1.81
NDUFA1O15239 AC211486.3-201ENST00000412694 621 ntBASIC3.77□□□□□ -1.81
NDUFA1O15239 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC3.77□□□□□ -1.81
NDUFA1O15239 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC3.77□□□□□ -1.81
NDUFA1O15239 AK4P4-201ENST00000419465 646 ntBASIC3.77□□□□□ -1.81
NDUFA1O15239 REREP1Y-201ENST00000422655 198 ntBASIC3.77□□□□□ -1.81
NDUFA1O15239 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC3.77□□□□□ -1.81
NDUFA1O15239 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NDUFA1O15239 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NDUFA1O15239 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms