Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC060775.1-201ENST00000518241 520 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 IGKV1OR22-1-201ENST00000521497 360 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC090281.1-201ENST00000523019 276 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 TATDN3-207ENST00000526641 1073 ntTSL 2 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC079064.1-201ENST00000528365 362 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC005632.2-201ENST00000564271 828 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC006120.1-201ENST00000579375 546 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 GMFG-202ENST00000594700 397 ntTSL 2 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 HNRNPA3P9-201ENST00000604913 979 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC008555.7-201ENST00000605008 583 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC004948.1-201ENST00000609858 672 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 RMST_9.1-201ENST00000619945 193 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC007347.2-201ENST00000623044 180 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC073869.10-201ENST00000642016 354 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC119674.1-209ENST00000642031 997 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC090971.4-201ENST00000560291 1800 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AL672167.1-205ENST00000641112 3080 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 RBMY1HP-201ENST00000382759 1389 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.93
CHKB-CPT1BH3BT56 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CHKB-CPT1BH3BT56 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 OR5E1P-201ENST00000305754 927 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 RNA5SP502-201ENST00000362694 119 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 SNORD35A-201ENST00000363389 86 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 RNA5SP114-201ENST00000363780 113 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 RNA5SP211-201ENST00000365516 117 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 CRP-204ENST00000368112 787 ntTSL 2 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 RNU6-178P-201ENST00000384631 104 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AL645733.1-201ENST00000402250 217 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AL160275.2-201ENST00000412010 394 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 RPL12P9-201ENST00000412942 488 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AL035658.1-201ENST00000415054 357 ntTSL 3 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 THEM7P-201ENST00000419556 672 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AC134879.1-201ENST00000426062 394 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 RPL7AP49-201ENST00000429522 581 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AL591438.1-201ENST00000433508 581 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 RPS10P3-201ENST00000439253 494 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 POU5F1P5-201ENST00000445059 658 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 ATP5G1P6-201ENST00000451206 412 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 EIF3LP2-201ENST00000457262 807 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 RPL24-206ENST00000495401 478 ntTSL 2 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 SNX18P24-201ENST00000505249 671 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms