Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 IGLV3-4-201ENST00000432300 244 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AL590682.1-201ENST00000437248 344 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 RPS4XP4-201ENST00000443195 763 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AL135929.1-201ENST00000449287 552 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 OFD1P4Y-201ENST00000455273 1179 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 RPS20P24-201ENST00000457473 361 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 RPS3AP49-201ENST00000472161 790 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 MARK2P8-201ENST00000476069 952 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 RN7SL241P-201ENST00000482973 236 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AC009646.1-201ENST00000510455 318 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 RNA5SP216-201ENST00000516111 123 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 CENPUP1-201ENST00000526649 1202 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AP001893.2-201ENST00000526949 202 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AL442663.2-201ENST00000554385 511 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 RN7SL366P-201ENST00000577957 292 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AC103792.1-201ENST00000603591 919 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AL020991.1-201ENST00000612314 373 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 MIR6745-201ENST00000612694 127 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 MIR8089-201ENST00000620165 82 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AC120349.2-201ENST00000625002 298 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 MFSD8-227ENST00000641393 4069 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 AC006213.6-201ENST00000623722 4179 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 AC107980.1-201ENST00000558671 3355 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 Y_RNA.263-201ENST00000364659 114 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 RNU4-7P-201ENST00000364758 141 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 Y_RNA.295-201ENST00000364918 102 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 LST1-211ENST00000376110 433 ntTSL 3 BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 MIR106B-201ENST00000385301 82 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 OR7E101P-201ENST00000400428 513 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 RPL5P20-201ENST00000403848 896 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 NACAP7-201ENST00000407371 609 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 RN7SKP168-201ENST00000410910 300 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 RPS20P15-201ENST00000412792 311 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 PGAM1P3-201ENST00000420790 565 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 VDAC1P6-201ENST00000430062 855 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 RPS10P3-201ENST00000439253 494 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 AC239860.1-201ENST00000444680 1270 ntBASIC7.42□□□□□ -1.22
PCDHGA11Q9Y5H2 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms