Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 AC010132.2-201ENST00000295493 1043 ntBASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 AL356981.1-201ENST00000454879 684 ntBASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 RN7SL738P-201ENST00000470264 297 ntBASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 MAL2-208ENST00000523307 556 ntTSL 4 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 AL158152.1-201ENST00000602652 1435 ntBASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 AC009163.6-201ENST00000612367 342 ntBASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 CYP4F35P-202ENST00000636121 390 ntBASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 RNVU1-6-201ENST00000364688 164 ntBASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 AL360081.1-201ENST00000428299 555 ntBASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 H3F3BP2-201ENST00000583907 357 ntBASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 PANDAR-201ENST00000629595 1506 ntBASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 LINC02035-201ENST00000610128 5476 ntBASIC8.22□□□□□ -1.09
SHANK2Q9UPX8 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 U3.36-201ENST00000408418 213 ntBASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 RPS18P6-201ENST00000476880 458 ntBASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 AC109462.1-201ENST00000491087 368 ntBASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 RN7SKP99-201ENST00000517028 307 ntBASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 OR5AM1P-201ENST00000532136 1032 ntBASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 AC024940.3-201ENST00000538551 316 ntBASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 NPM1P42-201ENST00000560329 862 ntBASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 AC087783.2-201ENST00000605070 562 ntBASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 AP000346.3-201ENST00000622821 210 ntBASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 AC022164.1-201ENST00000568767 2673 ntBASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SHANK2Q9UPX8 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.21□□□□□ -1.1
SHANK2Q9UPX8 NBPF8-201ENST00000583271 5330 ntBASIC8.21□□□□□ -1.1
SHANK2Q9UPX8 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.21□□□□□ -1.1
SHANK2Q9UPX8 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
SHANK2Q9UPX8 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
SHANK2Q9UPX8 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.21□□□□□ -1.1
SHANK2Q9UPX8 TTC3P1-201ENST00000399586 6081 ntBASIC8.21□□□□□ -1.1
SHANK2Q9UPX8 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 RPL11P3-201ENST00000395256 523 ntBASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 IGLV2-34-201ENST00000490007 283 ntBASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 AC127381.1-201ENST00000555979 939 ntBASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 MIR7641-1-201ENST00000627518 61 ntBASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 AP004289.1-201ENST00000436307 2205 ntBASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms