Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.74□□□□□ -1.33
PPARGC1AQ9UBK2 AC099654.15-201ENST00000639802 509 ntBASIC6.74□□□□□ -1.33
PPARGC1AQ9UBK2 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.74□□□□□ -1.33
PPARGC1AQ9UBK2 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PPARGC1AQ9UBK2 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
PPARGC1AQ9UBK2 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PPARGC1AQ9UBK2 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.74□□□□□ -1.33
PPARGC1AQ9UBK2 NAMPTP1-201ENST00000440465 2514 ntBASIC6.74□□□□□ -1.33
PPARGC1AQ9UBK2 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PPARGC1AQ9UBK2 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AC017079.1-201ENST00000333650 415 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 RN7SKP184-201ENST00000362348 333 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 RNU4-92P-201ENST00000363783 136 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AL603865.2-201ENST00000401679 213 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AL023284.3-201ENST00000407767 334 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 Z82198.3-201ENST00000421145 199 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 OR5M12P-201ENST00000423388 929 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 NAP1L4P2-201ENST00000425958 899 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AC003989.1-201ENST00000434569 565 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 USP9YP28-201ENST00000435142 589 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AL645939.3-201ENST00000435408 225 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AL359265.1-201ENST00000440296 795 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AL589880.1-201ENST00000448271 287 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 CYCSP42-201ENST00000450823 238 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 CST12P-201ENST00000457644 362 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 RPL3P13-201ENST00000550415 216 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 MIR4732-201ENST00000581873 76 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 SYPL1P2-201ENST00000582878 727 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 HSPD1P7-201ENST00000447985 1686 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AL355377.1-201ENST00000621125 1653 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AL022393.1-201ENST00000625142 1677 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AC005702.3-201ENST00000585345 1447 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 SMG1P5-202ENST00000529428 4219 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 SMG1P2-201ENST00000566127 4221 ntBASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PPARGC1AQ9UBK2 AC079298.1-201ENST00000625026 1619 ntBASIC6.72□□□□□ -1.33
PPARGC1AQ9UBK2 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.72□□□□□ -1.33
PPARGC1AQ9UBK2 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PPARGC1AQ9UBK2 ZNF658B-201ENST00000602828 3408 ntBASIC6.72□□□□□ -1.33
PPARGC1AQ9UBK2 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.72□□□□□ -1.33
PPARGC1AQ9UBK2 Y_RNA.318-201ENST00000365131 97 ntBASIC6.72□□□□□ -1.33
PPARGC1AQ9UBK2 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.72□□□□□ -1.33
PPARGC1AQ9UBK2 AC245036.1-201ENST00000391727 309 ntBASIC6.72□□□□□ -1.33
PPARGC1AQ9UBK2 AL445238.1-204ENST00000400311 463 ntBASIC6.72□□□□□ -1.33
PPARGC1AQ9UBK2 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.72□□□□□ -1.33
PPARGC1AQ9UBK2 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.72□□□□□ -1.33
PPARGC1AQ9UBK2 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PPARGC1AQ9UBK2 MTND4P3-201ENST00000417829 541 ntBASIC6.72□□□□□ -1.33
PPARGC1AQ9UBK2 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PPARGC1AQ9UBK2 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.72□□□□□ -1.33
PPARGC1AQ9UBK2 AC083862.1-201ENST00000427378 1242 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms