Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 SELENOWP1-201ENST00000322792 252 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 NPM1P4-201ENST00000414095 812 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 GTF3AP1-201ENST00000416942 1004 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 TNPO1P1-201ENST00000423641 1138 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 LYPLA1P1-201ENST00000434514 622 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 RANP1-206ENST00000455094 651 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 RPL38P3-201ENST00000484463 213 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 AC137627.1-201ENST00000545761 289 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 AC005840.5-201ENST00000619166 599 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 THAP12P9-201ENST00000503971 2360 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 RNA5SP453-201ENST00000362503 119 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 RN7SKP145-201ENST00000363291 303 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 RN7SKP279-201ENST00000411383 298 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 AC068138.1-201ENST00000412635 217 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 MRPS21P3-201ENST00000436696 262 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 RPS23P9-201ENST00000448848 438 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 YWHAEP1-201ENST00000453697 763 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 AC024558.1-201ENST00000505008 528 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 AC021678.3-201ENST00000517893 476 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 MRPS16P1-201ENST00000523462 412 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 OR5AM1P-201ENST00000532136 1032 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 MIR4776-2-201ENST00000580204 80 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 MIR1273E-201ENST00000581165 102 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 AC018809.2-201ENST00000602436 3823 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 AC007683.2-201ENST00000624681 714 ntBASIC5.37□□□□□ -1.55
CCDC88CQ9P219 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC88CQ9P219 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 SNORD56.6-201ENST00000384569 71 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 RPSAP35-201ENST00000413753 818 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AL596448.1-201ENST00000415024 392 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AL139148.1-201ENST00000427122 680 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 CYCSP6-201ENST00000434498 302 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AURKAPS1-201ENST00000451805 1212 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 snoU109.5-201ENST00000516231 132 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 IGBP1P1-201ENST00000554337 1009 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC025574.2-201ENST00000615621 514 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC016769.4-201ENST00000616893 535 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AL158152.1-201ENST00000602652 1435 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC130360.2-201ENST00000533477 1556 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AL353796.1-201ENST00000561542 3241 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 SAMM50P1-201ENST00000455403 1399 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms