Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 IGKV2-18-201ENST00000522607 343 ntBASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AC020763.5-201ENST00000623298 430 ntBASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AL121768.1-201ENST00000613917 2544 ntBASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 AC022164.1-201ENST00000568767 2673 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 RN7SKP29-201ENST00000410957 272 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 BMS1P17-202ENST00000416720 316 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 AL365220.1-201ENST00000432923 399 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 EEF1B2P6-201ENST00000445713 673 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 RAB28P2-201ENST00000454299 641 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 AC112187.1-201ENST00000455837 479 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 RN7SL352P-201ENST00000466002 277 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 RPS23P6-201ENST00000466136 431 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 AC099521.1-201ENST00000482557 334 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 DUTP7-201ENST00000507982 486 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 AC097486.1-201ENST00000515331 210 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 SNORA43.3-201ENST00000517240 103 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 AC079395.2-201ENST00000610982 737 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 AL139099.4-201ENST00000614802 114 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 RNA5SP439-201ENST00000617595 124 ntBASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.85□□□□□ -1.47
TM9SF3Q9HD45 UGT2B24P-201ENST00000514441 1597 ntBASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 RPS4XP5-201ENST00000419038 768 ntBASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 HMGB3P24-201ENST00000433260 622 ntBASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 Z84478.1-201ENST00000438230 1219 ntBASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 AL163193.1-201ENST00000444895 788 ntBASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 IGLV2-28-201ENST00000520681 304 ntBASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 TPM3P3-201ENST00000521343 354 ntBASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 IGLV3-30-201ENST00000524362 298 ntBASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 MIR1273E-201ENST00000581165 102 ntBASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 QTRT1P1-201ENST00000604344 1078 ntBASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 AC004890.3-201ENST00000605566 1095 ntBASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 AL451049.1-201ENST00000608672 497 ntBASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 uc_338.26-201ENST00000612659 160 ntBASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 AL445670.1-201ENST00000618889 801 ntBASIC5.84□□□□□ -1.47
TM9SF3Q9HD45 MIR6719-201ENST00000622428 87 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms