Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AMZ2P2-201ENST00000406819 1057 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 PPIAP20-201ENST00000449839 135 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AC002553.3-201ENST00000453002 341 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 PPIAP7-201ENST00000454070 489 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 FCF1P6-201ENST00000456841 595 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AC090058.1-201ENST00000498788 435 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AC093763.2-201ENST00000505334 1223 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 CR383658.1-201ENST00000514609 734 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 SCARNA1-201ENST00000517138 166 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 RN7SKP35-201ENST00000517210 151 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 IGKV3D-25-201ENST00000519599 235 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AP000620.1-201ENST00000527147 504 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AP003396.4-201ENST00000527574 265 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AC010547.7-201ENST00000570323 333 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AC245884.10-201ENST00000597355 337 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AL355802.4-201ENST00000607635 548 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AC018690.1-201ENST00000608144 626 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AC130304.1-201ENST00000622942 2385 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 AC018628.1-201ENST00000624147 3819 ntBASIC6.17□□□□□ -1.42
USP29Q9HBJ7 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.17□□□□□ -1.42
USP29Q9HBJ7 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 RN7SKP78-201ENST00000364711 318 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 RSL24D1P1-201ENST00000404972 493 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 SLC20A1P1-201ENST00000413906 956 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 CFL1P4-201ENST00000451536 498 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 AC098847.1-201ENST00000473094 348 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 AC007956.1-201ENST00000555623 542 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 NPM1P42-201ENST00000560329 862 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 AC007346.1-201ENST00000569208 867 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 LINC00556-201ENST00000569603 412 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms