Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RPL4-201ENST00000307961 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 RNU5A-1-201ENST00000362698 116 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 RN7SKP176-201ENST00000363673 318 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 RNU4-36P-201ENST00000364294 144 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 ITLN2-201ENST00000368029 1151 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 ZNF585A-203ENST00000392157 3190 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 LPIN1-203ENST00000396098 1761 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC013442.1-201ENST00000397347 228 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 IGLV8OR8-1-201ENST00000399730 352 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 MIR891A-201ENST00000401237 79 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 RPL21P67-201ENST00000402896 478 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC096949.1-201ENST00000412047 152 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 OR13E1P-201ENST00000417104 922 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 CRIP1P2-201ENST00000425396 228 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC007365.2-201ENST00000428806 458 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AL118511.2-201ENST00000436739 311 ntTSL 3 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC006970.1-201ENST00000442064 389 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 ATP5G1P6-201ENST00000451206 412 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 LINC02543-201ENST00000451285 845 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 TBL1XR1-214ENST00000457928 4101 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 RFESD-203ENST00000458310 2788 ntTSL 5 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 snoU13.7-201ENST00000459220 104 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC087588.1-201ENST00000462203 316 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 RN7SL643P-201ENST00000471845 291 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 RN7SL479P-201ENST00000472003 300 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 SLC2A10-202ENST00000486000 497 ntTSL 3 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 ACTG1P20-201ENST00000486001 468 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 TMEM255B-205ENST00000488362 694 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC127070.1-201ENST00000488441 484 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 OTUD6B-AS1-202ENST00000524003 2171 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 DHDDS-216ENST00000525682 1235 ntTSL 2 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AL136295.1-201ENST00000530611 2740 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 TRPT1-215ENST00000546089 684 ntTSL 3 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AL022318.2-201ENST00000558766 258 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 VAC14-AS1-202ENST00000562507 4853 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC083837.1-201ENST00000565297 2994 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC012186.1-201ENST00000566702 398 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC006236.1-201ENST00000576249 797 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 PSPN-202ENST00000597721 3911 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 IPO5P1-202ENST00000600039 287 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 UPP2-204ENST00000605860 2435 ntTSL 5 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 RN7SL827P-201ENST00000607480 288 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 UHRF1-205ENST00000620565 3965 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 pRNA.4-201ENST00000620973 89 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 CU634019.5-201ENST00000623518 924 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC012100.3-201ENST00000624738 575 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC092471.1-202ENST00000637160 999 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 PIK3CG-202ENST00000440650 3828 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 IKZF1-210ENST00000439701 3572 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 ZNF135-204ENST00000506786 3349 ntTSL 2 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 BRINP1-201ENST00000265922 3202 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 ACOT9-204ENST00000379303 3117 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 SLC8A1-205ENST00000405901 3139 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 PSEN1-204ENST00000394164 3046 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 TMCO4-201ENST00000294543 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 VSTM5-202ENST00000409977 2969 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 AC007938.2-201ENST00000604666 2634 ntBASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 SLAMF7-201ENST00000359331 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 TPCN1-202ENST00000392569 2558 ntTSL 2 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP3-3Q9BYR6 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 Z99129.4-201ENST00000624649 2435 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 CACNB4-209ENST00000534999 2369 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 TCF12-202ENST00000333725 4719 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AC098934.2-201ENST00000456105 2321 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 TTI2-201ENST00000360742 2242 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms