Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
HPS3Q969F9 OR13C3-201ENST00000374781 1108 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
HPS3Q969F9 AL096711.1-201ENST00000404780 554 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HPS3Q969F9 ARL2BPP3-201ENST00000421226 480 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.67□□□□□ -1.34
HPS3Q969F9 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.67□□□□□ -1.34
HPS3Q969F9 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.67□□□□□ -1.34
HPS3Q969F9 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.67□□□□□ -1.34
HPS3Q969F9 AL162739.1-201ENST00000450606 307 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 AC016027.4-201ENST00000450866 277 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 HMGB1P7-201ENST00000450921 612 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HPS3Q969F9 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.67□□□□□ -1.34
HPS3Q969F9 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.67□□□□□ -1.34
HPS3Q969F9 RPSAP39-201ENST00000467439 883 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 NPM1P29-201ENST00000483112 803 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 CCDC11P1-201ENST00000503137 1162 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 AC091874.2-201ENST00000505889 720 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 AC108103.1-201ENST00000511286 446 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HPS3Q969F9 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.67□□□□□ -1.34
HPS3Q969F9 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.67□□□□□ -1.34
HPS3Q969F9 OR56A7P-201ENST00000524865 941 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 AP003080.1-202ENST00000526526 915 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.67□□□□□ -1.34
HPS3Q969F9 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.67□□□□□ -1.34
HPS3Q969F9 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.67□□□□□ -1.34
HPS3Q969F9 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.67□□□□□ -1.34
HPS3Q969F9 MIR3154-201ENST00000577829 84 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 MIR4502-201ENST00000580432 81 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 MIR4433B-201ENST00000581329 102 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.67□□□□□ -1.34
HPS3Q969F9 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.67□□□□□ -1.34
HPS3Q969F9 BMS1P7-201ENST00000602440 1052 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 RPAP2P1-201ENST00000603626 1168 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 RPL12P48-201ENST00000605620 304 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.67□□□□□ -1.34
HPS3Q969F9 AC073593.1-201ENST00000624500 411 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HPS3Q969F9 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.67□□□□□ -1.34
HPS3Q969F9 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
HPS3Q969F9 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HPS3Q969F9 AC003985.2-201ENST00000562268 1669 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 AL161756.3-201ENST00000641216 2071 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.67□□□□□ -1.34
HPS3Q969F9 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HPS3Q969F9 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HPS3Q969F9 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HPS3Q969F9 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HPS3Q969F9 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.66□□□□□ -1.34
HPS3Q969F9 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
HPS3Q969F9 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.66□□□□□ -1.34
HPS3Q969F9 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.66□□□□□ -1.34
HPS3Q969F9 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HPS3Q969F9 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
HPS3Q969F9 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.66□□□□□ -1.34
HPS3Q969F9 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HPS3Q969F9 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HPS3Q969F9 NACAP7-201ENST00000407371 609 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HPS3Q969F9 AL354890.1-201ENST00000413730 346 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 BTF3P9-201ENST00000418784 283 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.66□□□□□ -1.34
HPS3Q969F9 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.66□□□□□ -1.34
HPS3Q969F9 AC130360.1-201ENST00000425489 1117 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.66□□□□□ -1.34
HPS3Q969F9 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.66□□□□□ -1.34
HPS3Q969F9 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.66□□□□□ -1.34
HPS3Q969F9 AL645638.1-201ENST00000440519 361 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 HMGN1P5-201ENST00000448591 263 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 CLIC4P1-201ENST00000453177 535 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 RN7SL254P-201ENST00000460609 284 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HPS3Q969F9 RN7SL170P-201ENST00000487098 295 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HPS3Q969F9 HSD3BP3-201ENST00000514706 994 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 AC130365.2-201ENST00000525882 1201 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 OR4A6P-201ENST00000534364 970 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.66□□□□□ -1.34
HPS3Q969F9 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.66□□□□□ -1.34
HPS3Q969F9 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.66□□□□□ -1.34
HPS3Q969F9 AC090888.3-201ENST00000558917 509 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.66□□□□□ -1.34
HPS3Q969F9 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.66□□□□□ -1.34
HPS3Q969F9 AC034229.4-201ENST00000607861 441 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 AC092681.3-201ENST00000609463 678 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 AC004801.6-201ENST00000616571 978 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 AL445528.2-201ENST00000620582 470 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 AC069234.4-201ENST00000621276 412 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 AC095038.2-201ENST00000621464 1070 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.66□□□□□ -1.34
HPS3Q969F9 AC073488.3-201ENST00000631611 778 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.66□□□□□ -1.34
HPS3Q969F9 AP000550.3-201ENST00000637734 379 ntBASIC6.66□□□□□ -1.34
HPS3Q969F9 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms