Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 AL391422.1-201ENST00000402155 436 ntBASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 MRPL53P1-201ENST00000414323 319 ntBASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 CBX1P5-201ENST00000475330 559 ntBASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 AC108693.1-201ENST00000496068 432 ntBASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 MIR4776-2-201ENST00000580204 80 ntBASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 AL139407.1-201ENST00000613826 1175 ntBASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 RPSAP73-201ENST00000614820 330 ntBASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 AC090510.2-201ENST00000617465 629 ntBASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 AL691477.1-201ENST00000624398 162 ntBASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 YES1P1-201ENST00000418510 1628 ntBASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 AL353796.1-201ENST00000561542 3241 ntBASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 VN1R21P-201ENST00000426703 765 ntBASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 NANOGP9-201ENST00000439890 892 ntBASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 AC019185.1-201ENST00000442718 389 ntBASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 IGBP1P3-201ENST00000447449 1000 ntBASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 snoU109.5-201ENST00000516231 132 ntBASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 AC079600.1-201ENST00000550326 297 ntBASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 AP005403.1-201ENST00000579720 229 ntBASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 Mico1.1-201ENST00000611698 204 ntBASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 AL355834.1-201ENST00000556602 3965 ntBASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHROOM3Q8TF72 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 RNA5SP394-201ENST00000364216 119 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 RPL37P18-201ENST00000411602 243 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 GABARAPL3-201ENST00000412799 354 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AL357752.1-201ENST00000412817 349 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 RPL35AP24-201ENST00000413846 330 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 PRUNEP1-201ENST00000425846 705 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 TMEM183AP1-205ENST00000432739 290 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AL512637.1-201ENST00000439523 1231 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 MED28P3-201ENST00000444288 531 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 CBX1P2-201ENST00000453841 458 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 MIR4505-201ENST00000582238 73 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 TTC41P-205ENST00000551270 3963 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 MIR375-201ENST00000362103 64 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 NME1P1-201ENST00000420914 382 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AL133173.1-201ENST00000423458 397 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AC091390.1-201ENST00000433904 331 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AZGP1P2-201ENST00000454506 345 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AC007386.1-201ENST00000455212 582 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 IGLV3-24-201ENST00000517477 197 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AC007346.2-201ENST00000564816 892 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AC106730.2-201ENST00000566641 540 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 MRPS21P9-201ENST00000571150 257 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms