Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 MAL2-207ENST00000522828 603 ntTSL 3 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 MIR4330-201ENST00000579077 105 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AL445647.2-201ENST00000615170 130 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 UBA3-213ENST00000631029 123 ntTSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AOX3P-204ENST00000491025 2107 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 RN7SKP28-201ENST00000364770 305 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AL133388.1-201ENST00000404509 287 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AL390119.1-201ENST00000440329 312 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 ACA64.4-201ENST00000459070 127 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 MINCR-206ENST00000524335 499 ntTSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 FAM27E4-201ENST00000605259 342 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 RPL34P3-201ENST00000421454 338 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 RPSAP73-201ENST00000614820 330 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC022726.2-201ENST00000634673 547 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 HSPD1P8-201ENST00000400121 1658 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 ALB-209ENST00000503124 1741 ntTSL 5 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC010733.2-201ENST00000589496 5702 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC093162.1-201ENST00000419682 124 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC091390.1-201ENST00000433904 331 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 RPS23P2-201ENST00000463671 415 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 RN7SL97P-201ENST00000486780 299 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 OR5M14P-201ENST00000506803 618 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC022832.1-201ENST00000530718 645 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AL356801.1-201ENST00000559320 294 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC018552.1-201ENST00000562099 811 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC009237.13-201ENST00000603193 276 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC087763.1-201ENST00000603391 286 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 FO393422.1-201ENST00000603908 708 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC137695.1-201ENST00000604126 489 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 PACRG-210ENST00000611387 279 ntTSL 5 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 MIR7159-201ENST00000620587 66 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC007342.5-201ENST00000571340 2142 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AL353763.1-201ENST00000624467 1628 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC097721.1-201ENST00000427150 1253 ntBASIC1.74□□□□□ -2.13
SYNE1Q8NF91 DAP3-209ENST00000465375 729 ntTSL 2 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC1.74□□□□□ -2.13
SYNE1Q8NF91 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms