Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 RN7SKP263-201ENST00000411194 309 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 AC007568.1-201ENST00000422912 471 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 NANOGP9-201ENST00000439890 892 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 AL163952.1-202ENST00000569625 600 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 SNORD91A-202ENST00000609620 191 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 AC135068.12-201ENST00000637370 931 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 SACS-202ENST00000402364 15134 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 AC010928.1-201ENST00000592477 1447 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 CENPIP1-201ENST00000425713 902 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 CT45A11P-201ENST00000448043 1134 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 AP001781.1-201ENST00000530977 207 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 TOMM20P2-201ENST00000540082 421 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 AC093765.1-201ENST00000603758 881 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 AC005962.2-201ENST00000611427 652 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS13CQ709C8 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS13CQ709C8 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS13CQ709C8 MIR551A-201ENST00000385042 96 ntBASIC4.34□□□□□ -1.71
VPS13CQ709C8 AK3P5-201ENST00000432033 519 ntBASIC4.34□□□□□ -1.71
VPS13CQ709C8 GSTM5P1-201ENST00000434751 660 ntBASIC4.34□□□□□ -1.71
VPS13CQ709C8 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS13CQ709C8 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.34□□□□□ -1.71
VPS13CQ709C8 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
VPS13CQ709C8 MIR4737-201ENST00000583979 81 ntBASIC4.34□□□□□ -1.71
VPS13CQ709C8 AP003789.1-201ENST00000617737 605 ntBASIC4.34□□□□□ -1.71
VPS13CQ709C8 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS13CQ709C8 DHX40P1-201ENST00000588725 1412 ntBASIC4.34□□□□□ -1.71
VPS13CQ709C8 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS13CQ709C8 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
VPS13CQ709C8 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
VPS13CQ709C8 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VPS13CQ709C8 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS13CQ709C8 AC007996.1-201ENST00000620414 2821 ntBASIC4.34□□□□□ -1.71
VPS13CQ709C8 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS13CQ709C8 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS13CQ709C8 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS13CQ709C8 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS13CQ709C8 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.34□□□□□ -1.71
VPS13CQ709C8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS13CQ709C8 RN7SL423P-201ENST00000486202 304 ntBASIC4.34□□□□□ -1.71
VPS13CQ709C8 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS13CQ709C8 OR5M2P-201ENST00000529003 936 ntBASIC4.34□□□□□ -1.71
VPS13CQ709C8 AC034105.4-201ENST00000568304 277 ntBASIC4.34□□□□□ -1.71
VPS13CQ709C8 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC4.34□□□□□ -1.71
VPS13CQ709C8 MIR6830-201ENST00000636015 70 ntBASIC4.34□□□□□ -1.71
VPS13CQ709C8 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS13CQ709C8 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS13CQ709C8 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
VPS13CQ709C8 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
VPS13CQ709C8 AP003119.3-201ENST00000566747 4192 ntBASIC4.34□□□□□ -1.71
VPS13CQ709C8 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS13CQ709C8 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS13CQ709C8 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS13CQ709C8 FAM32BP-201ENST00000344033 333 ntBASIC4.34□□□□□ -1.72
VPS13CQ709C8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
VPS13CQ709C8 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.34□□□□□ -1.72
VPS13CQ709C8 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.34□□□□□ -1.72
VPS13CQ709C8 OR2B7P-201ENST00000429302 934 ntBASIC4.34□□□□□ -1.72
VPS13CQ709C8 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.34□□□□□ -1.72
VPS13CQ709C8 AC011742.2-201ENST00000443818 352 ntBASIC4.34□□□□□ -1.72
VPS13CQ709C8 OR52A4P-201ENST00000472867 958 ntBASIC4.34□□□□□ -1.72
VPS13CQ709C8 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.34□□□□□ -1.72
VPS13CQ709C8 MIR4675-201ENST00000577898 77 ntBASIC4.34□□□□□ -1.72
VPS13CQ709C8 MIR4715-201ENST00000584117 79 ntBASIC4.34□□□□□ -1.72
VPS13CQ709C8 BNIP3P11-201ENST00000603878 563 ntBASIC4.34□□□□□ -1.72
VPS13CQ709C8 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VPS13CQ709C8 CR381572.2-201ENST00000624852 397 ntBASIC4.34□□□□□ -1.72
VPS13CQ709C8 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
VPS13CQ709C8 AC140479.2-201ENST00000421567 3130 ntBASIC4.34□□□□□ -1.72
VPS13CQ709C8 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VPS13CQ709C8 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.34□□□□□ -1.72
VPS13CQ709C8 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VPS13CQ709C8 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.34□□□□□ -1.72
VPS13CQ709C8 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VPS13CQ709C8 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VPS13CQ709C8 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VPS13CQ709C8 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
VPS13CQ709C8 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms