Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PDZRN4Q6ZMN7 NLRP3P1-201ENST00000622303 1785 ntBASIC7.56□□□□□ -1.2
PDZRN4Q6ZMN7 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
PDZRN4Q6ZMN7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 TPTE2P2-201ENST00000403471 1466 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 Z95114.1-201ENST00000624264 14574 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC232271.1-201ENST00000602455 2715 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 RNA5SP188-201ENST00000362916 129 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 RNU6-236P-201ENST00000363886 106 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 RNA5SP172-201ENST00000365061 118 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 RNU6-192P-201ENST00000391253 100 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 LDHAP5-201ENST00000394996 622 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 SFR1P1-201ENST00000403720 688 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 NME1P1-201ENST00000420914 382 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 BX119321.1-201ENST00000428912 797 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AL035407.1-201ENST00000429211 571 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 RPL3P11-201ENST00000434028 1146 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC090018.1-201ENST00000434369 367 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AL356121.1-201ENST00000442911 156 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 EEF1B2P5-201ENST00000444820 548 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC073387.1-201ENST00000453261 709 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 USP9YP25-201ENST00000457708 443 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 RPSAP37-201ENST00000470913 821 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 SNRPCP3-201ENST00000474888 476 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC079203.1-201ENST00000487972 404 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 PFN2-213ENST00000494827 793 ntTSL 4 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 RPF2P2-201ENST00000504693 896 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC010442.1-201ENST00000515583 816 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 EIF4A3P1-201ENST00000578499 647 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC080078.2-201ENST00000603766 501 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 DPRXP5-201ENST00000604662 539 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC010245.2-201ENST00000606908 1167 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 MIR6813-201ENST00000621638 56 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC025287.2-201ENST00000621911 668 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 CASC19-274ENST00000642018 970 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 MTND4P26-201ENST00000415971 1359 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 AC005261.4-201ENST00000600047 1385 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 NCOA4P2-201ENST00000340589 1813 ntBASIC7.55□□□□□ -1.2
PDZRN4Q6ZMN7 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC7.54□□□□□ -1.2
PDZRN4Q6ZMN7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
PDZRN4Q6ZMN7 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN4Q6ZMN7 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.54□□□□□ -1.2
PDZRN4Q6ZMN7 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN4Q6ZMN7 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN4Q6ZMN7 AC007485.2-201ENST00000623493 1667 ntBASIC7.54□□□□□ -1.2
PDZRN4Q6ZMN7 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN4Q6ZMN7 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
PDZRN4Q6ZMN7 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN4Q6ZMN7 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN4Q6ZMN7 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN4Q6ZMN7 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.54□□□□□ -1.2
PDZRN4Q6ZMN7 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.54□□□□□ -1.2
PDZRN4Q6ZMN7 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN4Q6ZMN7 ELL2P3-201ENST00000457883 1602 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms