Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 NDUFS5P5-201ENST00000437256 321 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 FCF1P6-201ENST00000456841 595 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 LSM3P4-201ENST00000502948 309 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AP001960.1-201ENST00000506494 658 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 SCARNA18.1-201ENST00000516330 83 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 RNA5SP438-201ENST00000516561 112 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AP003396.4-201ENST00000527574 265 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 PCNAP4-201ENST00000532690 730 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AC023310.2-201ENST00000553844 547 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AC002310.3-201ENST00000569728 723 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 OR1AB1P-201ENST00000585564 761 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AC096947.1-201ENST00000603233 470 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 GMCL1P2-201ENST00000605230 823 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AC027449.1-201ENST00000608890 407 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 RNA5SP477-201ENST00000362639 119 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 ATP5F1P6-201ENST00000402768 767 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 RNU2-18P-201ENST00000411224 162 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 MRPL53P1-201ENST00000414323 319 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 CR848007.2-201ENST00000424918 787 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 TUBB4BP6-201ENST00000437576 479 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AC098826.2-201ENST00000452011 651 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 LDHBP2-201ENST00000456969 1005 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AC019084.1-201ENST00000457337 432 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 RNU1-88P-201ENST00000459274 128 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 RN7SL57P-201ENST00000493687 290 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 UBE2V1P12-201ENST00000503954 474 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 OR5H7P-201ENST00000514084 930 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 SETP21-201ENST00000514799 892 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 Y_RNA.667-201ENST00000516212 107 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AC139365.2-201ENST00000517972 253 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AC011853.1-201ENST00000518911 454 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 WBP1LP3-201ENST00000523033 208 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AC025857.2-201ENST00000602711 238 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 HIRAP1-201ENST00000605318 787 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AC090912.3-201ENST00000609775 533 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AC008833.1-201ENST00000611633 691 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AC084824.5-201ENST00000612009 413 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AL035661.1-201ENST00000620459 1144 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AL049777.1-201ENST00000622740 518 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AP000770.2-201ENST00000623694 100 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 OR6C71P-202ENST00000641886 1107 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AC117409.1-201ENST00000470499 1310 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 CR383656.5-201ENST00000547616 1340 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 AL161901.1-201ENST00000624954 3425 ntBASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
ZNF549Q6P9A3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms