Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 OR8G3P-201ENST00000533406 921 ntBASIC3.84□□□□□ -1.79
RPL39P62891 AC027369.5-201ENST00000533838 755 ntBASIC3.84□□□□□ -1.79
RPL39P62891 LSM3P2-201ENST00000551246 273 ntBASIC3.84□□□□□ -1.79
RPL39P62891 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC3.84□□□□□ -1.79
RPL39P62891 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC3.84□□□□□ -1.79
RPL39P62891 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC3.84□□□□□ -1.79
RPL39P62891 AC040958.1-201ENST00000561102 201 ntBASIC3.84□□□□□ -1.79
RPL39P62891 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC3.84□□□□□ -1.79
RPL39P62891 MRPL45P2-203ENST00000573318 473 ntBASIC3.84□□□□□ -1.79
RPL39P62891 TEX41-218ENST00000596540 882 ntTSL 5 BASIC3.84□□□□□ -1.79
RPL39P62891 AP000769.2-201ENST00000602344 396 ntBASIC3.84□□□□□ -1.79
RPL39P62891 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC3.84□□□□□ -1.79
RPL39P62891 AC022919.1-201ENST00000624979 626 ntBASIC3.84□□□□□ -1.79
RPL39P62891 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC3.84□□□□□ -1.79
RPL39P62891 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC3.84□□□□□ -1.79
RPL39P62891 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC3.84□□□□□ -1.79
RPL39P62891 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC3.84□□□□□ -1.79
RPL39P62891 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RPL39P62891 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RPL39P62891 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
RPL39P62891 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RPL39P62891 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC3.84□□□□□ -1.8
RPL39P62891 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RPL39P62891 HSPD1P9-201ENST00000420325 1636 ntBASIC3.84□□□□□ -1.8
RPL39P62891 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RPL39P62891 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RPL39P62891 ERVFRD-3-201ENST00000578561 1617 ntBASIC3.84□□□□□ -1.8
RPL39P62891 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.8
RPL39P62891 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC3.84□□□□□ -1.8
RPL39P62891 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC3.84□□□□□ -1.8
RPL39P62891 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
RPL39P62891 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RPL39P62891 DLD-205ENST00000440410 1993 ntTSL 2 BASIC3.83□□□□□ -1.8
RPL39P62891 AL731532.2-201ENST00000623542 1953 ntBASIC3.83□□□□□ -1.8
RPL39P62891 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RPL39P62891 AL162456.1-201ENST00000634535 2006 ntBASIC3.83□□□□□ -1.8
RPL39P62891 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPL39P62891 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RPL39P62891 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC3.83□□□□□ -1.8
RPL39P62891 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
RPL39P62891 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPL39P62891 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RPL39P62891 CDC123-202ENST00000378900 933 ntTSL 5 BASIC3.83□□□□□ -1.8
RPL39P62891 SNORA51.9-201ENST00000384295 124 ntBASIC3.83□□□□□ -1.8
RPL39P62891 SNORA48.4-201ENST00000391089 134 ntBASIC3.83□□□□□ -1.8
RPL39P62891 CTSL3P-202ENST00000412179 788 ntBASIC3.83□□□□□ -1.8
RPL39P62891 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC3.83□□□□□ -1.8
RPL39P62891 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RPL39P62891 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC3.83□□□□□ -1.8
RPL39P62891 AC007161.1-204ENST00000423039 460 ntBASIC3.83□□□□□ -1.8
RPL39P62891 AC017019.1-201ENST00000426129 261 ntBASIC3.83□□□□□ -1.8
RPL39P62891 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC3.83□□□□□ -1.8
RPL39P62891 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC3.83□□□□□ -1.8
RPL39P62891 HMGB1P7-201ENST00000450921 612 ntBASIC3.83□□□□□ -1.8
RPL39P62891 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RPL39P62891 MTCO1P55-201ENST00000489829 745 ntBASIC3.83□□□□□ -1.8
RPL39P62891 RN7SKP35-201ENST00000517210 151 ntBASIC3.83□□□□□ -1.8
RPL39P62891 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RPL39P62891 OR11H3P-201ENST00000554547 982 ntBASIC3.83□□□□□ -1.8
RPL39P62891 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC3.83□□□□□ -1.8
RPL39P62891 RPA2P1-201ENST00000556557 721 ntBASIC3.83□□□□□ -1.8
RPL39P62891 HMGN1P26-201ENST00000558737 303 ntBASIC3.83□□□□□ -1.8
RPL39P62891 AL356801.1-201ENST00000559320 294 ntBASIC3.83□□□□□ -1.8
RPL39P62891 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC3.83□□□□□ -1.8
RPL39P62891 AP005403.1-201ENST00000579720 229 ntBASIC3.83□□□□□ -1.8
RPL39P62891 WBP1LP11-201ENST00000586141 328 ntBASIC3.83□□□□□ -1.8
RPL39P62891 AC090236.2-201ENST00000587933 1101 ntBASIC3.83□□□□□ -1.8
RPL39P62891 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC3.83□□□□□ -1.8
RPL39P62891 AC125494.2-201ENST00000602431 657 ntBASIC3.83□□□□□ -1.8
RPL39P62891 AC108673.3-201ENST00000609183 335 ntBASIC3.83□□□□□ -1.8
RPL39P62891 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC3.83□□□□□ -1.8
RPL39P62891 AC245014.3-201ENST00000618589 347 ntBASIC3.83□□□□□ -1.8
RPL39P62891 MIR6823-201ENST00000622118 61 ntBASIC3.83□□□□□ -1.8
RPL39P62891 AC135068.5-201ENST00000624197 983 ntBASIC3.83□□□□□ -1.8
RPL39P62891 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPL39P62891 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RPL39P62891 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RPL39P62891 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC3.83□□□□□ -1.8
RPL39P62891 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPL39P62891 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC3.83□□□□□ -1.8
RPL39P62891 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RPL39P62891 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RPL39P62891 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPL39P62891 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
RPL39P62891 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RPL39P62891 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RPL39P62891 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC3.83□□□□□ -1.8
RPL39P62891 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
RPL39P62891 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPL39P62891 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC3.82□□□□□ -1.8
RPL39P62891 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPL39P62891 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
RPL39P62891 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.82□□□□□ -1.8
RPL39P62891 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RPL39P62891 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC3.82□□□□□ -1.8
RPL39P62891 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RPL39P62891 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPL39P62891 RNA5SP231-201ENST00000410496 138 ntBASIC3.82□□□□□ -1.8
RPL39P62891 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC3.82□□□□□ -1.8
RPL39P62891 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms