Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.95□□□□□ -1.46
LIMK1P53667 AL450996.1-201ENST00000445574 1202 ntBASIC5.95□□□□□ -1.46
LIMK1P53667 AC004815.1-201ENST00000484185 331 ntBASIC5.95□□□□□ -1.46
LIMK1P53667 RN7SL184P-201ENST00000488308 297 ntBASIC5.95□□□□□ -1.46
LIMK1P53667 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.95□□□□□ -1.46
LIMK1P53667 HAUS8P1-201ENST00000549005 542 ntBASIC5.95□□□□□ -1.46
LIMK1P53667 IGBP1P1-201ENST00000554337 1009 ntBASIC5.95□□□□□ -1.46
LIMK1P53667 AL121579.2-201ENST00000555466 590 ntBASIC5.95□□□□□ -1.46
LIMK1P53667 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.95□□□□□ -1.46
LIMK1P53667 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.95□□□□□ -1.46
LIMK1P53667 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.95□□□□□ -1.46
LIMK1P53667 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.95□□□□□ -1.46
LIMK1P53667 AC006840.1-201ENST00000623069 542 ntBASIC5.95□□□□□ -1.46
LIMK1P53667 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.95□□□□□ -1.46
LIMK1P53667 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIMK1P53667 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
LIMK1P53667 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LIMK1P53667 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LIMK1P53667 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.95□□□□□ -1.46
LIMK1P53667 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.95□□□□□ -1.46
LIMK1P53667 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIMK1P53667 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIMK1P53667 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LIMK1P53667 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIMK1P53667 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
LIMK1P53667 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIMK1P53667 AC097461.1-201ENST00000568928 2821 ntBASIC5.94□□□□□ -1.46
LIMK1P53667 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIMK1P53667 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.94□□□□□ -1.46
LIMK1P53667 PDZK1P1-202ENST00000425209 1350 ntBASIC5.94□□□□□ -1.46
LIMK1P53667 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.94□□□□□ -1.46
LIMK1P53667 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIMK1P53667 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIMK1P53667 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.94□□□□□ -1.46
LIMK1P53667 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIMK1P53667 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIMK1P53667 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIMK1P53667 AL672167.2-201ENST00000377164 879 ntBASIC5.94□□□□□ -1.46
LIMK1P53667 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.94□□□□□ -1.46
LIMK1P53667 SEPT7P8-201ENST00000413308 775 ntBASIC5.94□□□□□ -1.46
LIMK1P53667 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.94□□□□□ -1.46
LIMK1P53667 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIMK1P53667 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIMK1P53667 YY1P1-201ENST00000427625 668 ntBASIC5.94□□□□□ -1.46
LIMK1P53667 Z84478.1-201ENST00000438230 1219 ntBASIC5.94□□□□□ -1.46
LIMK1P53667 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.94□□□□□ -1.46
LIMK1P53667 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.94□□□□□ -1.46
LIMK1P53667 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIMK1P53667 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.94□□□□□ -1.46
LIMK1P53667 NPM1P27-201ENST00000502784 830 ntBASIC5.94□□□□□ -1.46
LIMK1P53667 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.94□□□□□ -1.46
LIMK1P53667 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.94□□□□□ -1.46
LIMK1P53667 RNA5SP92-201ENST00000516437 110 ntBASIC5.94□□□□□ -1.46
LIMK1P53667 AC020937.1-201ENST00000519677 1013 ntBASIC5.94□□□□□ -1.46
LIMK1P53667 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.94□□□□□ -1.46
LIMK1P53667 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.94□□□□□ -1.46
LIMK1P53667 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.94□□□□□ -1.46
LIMK1P53667 OR4A40P-201ENST00000533878 948 ntBASIC5.94□□□□□ -1.46
LIMK1P53667 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.94□□□□□ -1.46
LIMK1P53667 FAM27E4-201ENST00000605259 342 ntBASIC5.94□□□□□ -1.46
LIMK1P53667 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.94□□□□□ -1.46
LIMK1P53667 MTCO1P1-201ENST00000624263 1081 ntBASIC5.94□□□□□ -1.46
LIMK1P53667 AL357562.1-201ENST00000624911 609 ntBASIC5.94□□□□□ -1.46
LIMK1P53667 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.94□□□□□ -1.46
LIMK1P53667 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
LIMK1P53667 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIMK1P53667 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.94□□□□□ -1.46
LIMK1P53667 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.94□□□□□ -1.46
LIMK1P53667 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.94□□□□□ -1.46
LIMK1P53667 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LIMK1P53667 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
LIMK1P53667 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LIMK1P53667 THAP12P8-201ENST00000447914 2115 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LIMK1P53667 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.93□□□□□ -1.46
LIMK1P53667 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.93□□□□□ -1.46
LIMK1P53667 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.93□□□□□ -1.46
LIMK1P53667 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
LIMK1P53667 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.93□□□□□ -1.46
LIMK1P53667 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
LIMK1P53667 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.93□□□□□ -1.46
LIMK1P53667 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
LIMK1P53667 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
LIMK1P53667 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LIMK1P53667 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
LIMK1P53667 AC103591.2-201ENST00000265259 766 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 RNA5SP394-201ENST00000364216 119 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 RN7SKP128-201ENST00000364270 303 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 HMGB1P20-201ENST00000402555 677 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 AL023284.3-201ENST00000407767 334 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 RN7SKP59-201ENST00000410520 314 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 HMGA1P8-201ENST00000414130 321 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 AL596448.1-201ENST00000415024 392 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.93□□□□□ -1.46
LIMK1P53667 VN1R31P-201ENST00000417498 730 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 RPA2P2-201ENST00000419698 796 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 AC127526.2-201ENST00000426436 775 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.93□□□□□ -1.46
LIMK1P53667 ZNF619P1-201ENST00000446539 752 ntBASIC5.93□□□□□ -1.46
LIMK1P53667 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms