Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC9.73□□□□□ -0.85
SMARCA2P51531 AC019050.1-201ENST00000418508 492 ntBASIC9.73□□□□□ -0.85
SMARCA2P51531 NANOGP9-201ENST00000439890 892 ntBASIC9.73□□□□□ -0.85
SMARCA2P51531 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC9.73□□□□□ -0.85
SMARCA2P51531 AC097484.1-201ENST00000471148 389 ntBASIC9.73□□□□□ -0.85
SMARCA2P51531 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC9.73□□□□□ -0.85
SMARCA2P51531 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC9.73□□□□□ -0.85
SMARCA2P51531 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC9.73□□□□□ -0.85
SMARCA2P51531 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMARCA2P51531 EDDM3DP-201ENST00000554692 434 ntBASIC9.73□□□□□ -0.85
SMARCA2P51531 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC9.73□□□□□ -0.85
SMARCA2P51531 MIR5096-201ENST00000583713 70 ntBASIC9.73□□□□□ -0.85
SMARCA2P51531 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SMARCA2P51531 MAK-202ENST00000354489 3941 ntTSL 5 BASIC9.73□□□□□ -0.85
SMARCA2P51531 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC9.73□□□□□ -0.85
SMARCA2P51531 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMARCA2P51531 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMARCA2P51531 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SMARCA2P51531 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SMARCA2P51531 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SMARCA2P51531 AC006206.1-201ENST00000544842 3387 ntBASIC9.73□□□□□ -0.85
SMARCA2P51531 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC9.73□□□□□ -0.85
SMARCA2P51531 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA2P51531 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA2P51531 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA2P51531 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC9.72□□□□□ -0.85
SMARCA2P51531 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA2P51531 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA2P51531 THAP12P4-201ENST00000528321 2266 ntBASIC9.72□□□□□ -0.85
SMARCA2P51531 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
SMARCA2P51531 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC9.72□□□□□ -0.85
SMARCA2P51531 ZDHHC20P1-204ENST00000435787 423 ntBASIC9.72□□□□□ -0.85
SMARCA2P51531 AC096754.1-201ENST00000508904 818 ntBASIC9.72□□□□□ -0.85
SMARCA2P51531 DHFRP1-201ENST00000579682 559 ntBASIC9.72□□□□□ -0.85
SMARCA2P51531 MIR4691-201ENST00000583764 85 ntBASIC9.72□□□□□ -0.85
SMARCA2P51531 MIR4737-201ENST00000583979 81 ntBASIC9.72□□□□□ -0.85
SMARCA2P51531 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
SMARCA2P51531 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC9.72□□□□□ -0.85
SMARCA2P51531 AC099494.2-201ENST00000623371 978 ntBASIC9.72□□□□□ -0.85
SMARCA2P51531 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA2P51531 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
SMARCA2P51531 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC9.72□□□□□ -0.85
SMARCA2P51531 CASC19-221ENST00000641309 1382 ntBASIC9.72□□□□□ -0.85
SMARCA2P51531 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA2P51531 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA2P51531 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC9.72□□□□□ -0.85
SMARCA2P51531 NPM1P40-201ENST00000412758 733 ntBASIC9.71□□□□□ -0.85
SMARCA2P51531 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC9.71□□□□□ -0.85
SMARCA2P51531 AC073410.1-201ENST00000435125 589 ntBASIC9.71□□□□□ -0.85
SMARCA2P51531 MEMO1P4-201ENST00000453590 386 ntBASIC9.71□□□□□ -0.85
SMARCA2P51531 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC9.71□□□□□ -0.85
SMARCA2P51531 PDCL3P4-201ENST00000489621 720 ntBASIC9.71□□□□□ -0.85
SMARCA2P51531 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC9.71□□□□□ -0.85
SMARCA2P51531 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC9.71□□□□□ -0.85
SMARCA2P51531 AC068790.7-201ENST00000602347 528 ntBASIC9.71□□□□□ -0.85
SMARCA2P51531 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
SMARCA2P51531 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.85
SMARCA2P51531 CAST-202ENST00000325674 3356 ntTSL 5 BASIC9.71□□□□□ -0.85
SMARCA2P51531 MIPEPP2-201ENST00000422560 1819 ntBASIC9.71□□□□□ -0.85
SMARCA2P51531 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SMARCA2P51531 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
SMARCA2P51531 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
SMARCA2P51531 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SMARCA2P51531 RNA5SP326-201ENST00000363209 110 ntBASIC9.71□□□□□ -0.86
SMARCA2P51531 RNA5SP505-201ENST00000364748 108 ntBASIC9.71□□□□□ -0.86
SMARCA2P51531 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC9.71□□□□□ -0.86
SMARCA2P51531 RN7SL481P-201ENST00000477764 299 ntBASIC9.71□□□□□ -0.86
SMARCA2P51531 AC005000.1-201ENST00000536192 288 ntBASIC9.71□□□□□ -0.86
SMARCA2P51531 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SMARCA2P51531 AC073575.2-201ENST00000614212 627 ntBASIC9.71□□□□□ -0.86
SMARCA2P51531 AP003789.1-201ENST00000617737 605 ntBASIC9.71□□□□□ -0.86
SMARCA2P51531 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SMARCA2P51531 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC9.71□□□□□ -0.86
SMARCA2P51531 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SMARCA2P51531 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC9.7□□□□□ -0.86
SMARCA2P51531 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA2P51531 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA2P51531 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC9.7□□□□□ -0.86
SMARCA2P51531 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA2P51531 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
SMARCA2P51531 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
SMARCA2P51531 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC9.7□□□□□ -0.86
SMARCA2P51531 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA2P51531 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA2P51531 RPS16P5-201ENST00000406501 404 ntBASIC9.7□□□□□ -0.86
SMARCA2P51531 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC9.7□□□□□ -0.86
SMARCA2P51531 AC008072.1-201ENST00000434254 824 ntBASIC9.7□□□□□ -0.86
SMARCA2P51531 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC9.7□□□□□ -0.86
SMARCA2P51531 OSTCP1-201ENST00000455507 450 ntBASIC9.7□□□□□ -0.86
SMARCA2P51531 AL161747.1-201ENST00000480068 358 ntBASIC9.7□□□□□ -0.86
SMARCA2P51531 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC9.7□□□□□ -0.86
SMARCA2P51531 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA2P51531 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA2P51531 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC9.7□□□□□ -0.86
SMARCA2P51531 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA2P51531 AC005341.1-201ENST00000571086 708 ntBASIC9.7□□□□□ -0.86
SMARCA2P51531 NAA60-237ENST00000615865 326 ntTSL 5 BASIC9.7□□□□□ -0.86
SMARCA2P51531 AC068831.8-201ENST00000620171 435 ntBASIC9.7□□□□□ -0.86
SMARCA2P51531 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC9.7□□□□□ -0.86
SMARCA2P51531 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms