Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC092451.3-201ENST00000625067 1343 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN6P29350 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN6P29350 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN6P29350 AL034546.1-201ENST00000623740 3693 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
PTPN6P29350 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN6P29350 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN6P29350 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
PTPN6P29350 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PTPN6P29350 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PTPN6P29350 SUGT1P2-201ENST00000379452 992 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.49□□□□□ -1.53
PTPN6P29350 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.49□□□□□ -1.53
PTPN6P29350 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.49□□□□□ -1.53
PTPN6P29350 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.49□□□□□ -1.53
PTPN6P29350 AL389925.1-201ENST00000432257 728 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.49□□□□□ -1.53
PTPN6P29350 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN6P29350 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.49□□□□□ -1.53
PTPN6P29350 AC094085.1-201ENST00000468914 584 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.49□□□□□ -1.53
PTPN6P29350 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PTPN6P29350 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.49□□□□□ -1.53
PTPN6P29350 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.49□□□□□ -1.53
PTPN6P29350 MTCO3P42-201ENST00000509488 518 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 OR5H7P-201ENST00000514084 930 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 MTCO3P39-201ENST00000514812 518 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 GAPDHP62-201ENST00000515313 990 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 SCARNA18.1-201ENST00000516330 83 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 RNU4-18P-201ENST00000516751 149 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 IGKV2-4-201ENST00000523070 340 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 AC027026.1-201ENST00000532323 742 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.49□□□□□ -1.53
PTPN6P29350 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
PTPN6P29350 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.49□□□□□ -1.53
PTPN6P29350 AC005244.1-201ENST00000582566 339 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.49□□□□□ -1.53
PTPN6P29350 NANOGP3-201ENST00000605855 286 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.49□□□□□ -1.53
PTPN6P29350 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.49□□□□□ -1.53
PTPN6P29350 RNA5SP439-201ENST00000617595 124 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.49□□□□□ -1.53
PTPN6P29350 AL035661.1-201ENST00000620459 1144 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 AP001962.1-201ENST00000624114 559 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 OR11H2-202ENST00000641517 1085 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN6P29350 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN6P29350 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
PTPN6P29350 RNF19BPY-201ENST00000458209 1550 ntBASIC5.49□□□□□ -1.53
PTPN6P29350 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN6P29350 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN6P29350 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN6P29350 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN6P29350 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN6P29350 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN6P29350 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
PTPN6P29350 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN6P29350 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN6P29350 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN6P29350 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN6P29350 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN6P29350 SAMM50P1-201ENST00000455403 1399 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN6P29350 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN6P29350 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN6P29350 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN6P29350 RNA5SP273-201ENST00000362484 113 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 RNA5SP477-201ENST00000362639 119 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 RN7SKP185-201ENST00000362813 326 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN6P29350 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
PTPN6P29350 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN6P29350 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN6P29350 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 GAPDHP48-201ENST00000436626 961 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 GEMIN2P1-201ENST00000454246 752 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 RPL12P24-201ENST00000474907 486 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
PTPN6P29350 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN6P29350 AC105384.2-201ENST00000508433 640 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
PTPN6P29350 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN6P29350 AP002981.1-201ENST00000517692 975 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 AC060775.1-201ENST00000518241 520 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN6P29350 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN6P29350 AC135626.1-201ENST00000556983 435 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN6P29350 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN6P29350 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN6P29350 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN6P29350 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN6P29350 AL136131.3-201ENST00000607600 188 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 AC015982.1-201ENST00000608113 465 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 FO681491.1-202ENST00000623392 737 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN6P29350 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms