Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC010132.2-201ENST00000295493 1043 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 U3.10-201ENST00000364459 214 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EPHA3P29320 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EPHA3P29320 RNU6-354P-201ENST00000383862 107 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 RNU6-610P-201ENST00000384264 107 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EPHA3P29320 RN7SKP166-201ENST00000410812 305 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 AC245096.1-201ENST00000413104 546 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.87□□□□□ -1.47
EPHA3P29320 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EPHA3P29320 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.87□□□□□ -1.47
EPHA3P29320 AP003385.1-201ENST00000426387 893 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 FO393414.1-201ENST00000428697 1184 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.87□□□□□ -1.47
EPHA3P29320 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EPHA3P29320 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.87□□□□□ -1.47
EPHA3P29320 BMS1P11-201ENST00000442351 885 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 SLAMF6P1-201ENST00000451067 602 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 AL354872.1-201ENST00000456361 967 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 TREML3P-201ENST00000457327 501 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 BMS1P9-201ENST00000457640 885 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 AC008379.1-201ENST00000463655 464 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 RPL5P33-201ENST00000487833 905 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.87□□□□□ -1.47
EPHA3P29320 SUMO2P5-201ENST00000506790 245 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EPHA3P29320 AC111000.6-201ENST00000514471 709 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 SETP21-201ENST00000514799 892 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 AC093816.1-201ENST00000515076 913 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 RN7SKP288-201ENST00000516227 268 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.87□□□□□ -1.47
EPHA3P29320 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.87□□□□□ -1.47
EPHA3P29320 CHEK2P2-201ENST00000554701 672 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 DPPA3P2-202ENST00000557188 1219 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.87□□□□□ -1.47
EPHA3P29320 AC124016.2-201ENST00000610058 665 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 MIR6774-201ENST00000614651 70 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.87□□□□□ -1.47
EPHA3P29320 AL512427.1-201ENST00000618593 349 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 AL078595.3-201ENST00000623815 1166 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 AL590396.4-201ENST00000636779 956 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
EPHA3P29320 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.87□□□□□ -1.47
EPHA3P29320 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EPHA3P29320 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
EPHA3P29320 AL359715.4-201ENST00000606629 1436 ntBASIC5.87□□□□□ -1.47
EPHA3P29320 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
EPHA3P29320 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EPHA3P29320 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EPHA3P29320 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EPHA3P29320 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.87□□□□□ -1.47
EPHA3P29320 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
EPHA3P29320 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EPHA3P29320 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
EPHA3P29320 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EPHA3P29320 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EPHA3P29320 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.86□□□□□ -1.47
EPHA3P29320 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
EPHA3P29320 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.86□□□□□ -1.47
EPHA3P29320 AC239868.2-201ENST00000564237 4527 ntBASIC5.86□□□□□ -1.47
EPHA3P29320 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHA3P29320 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EPHA3P29320 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHA3P29320 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHA3P29320 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHA3P29320 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHA3P29320 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EPHA3P29320 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EPHA3P29320 RN7SKP128-201ENST00000364270 303 ntBASIC5.86□□□□□ -1.47
EPHA3P29320 MIR138-2-201ENST00000384916 84 ntBASIC5.86□□□□□ -1.47
EPHA3P29320 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
EPHA3P29320 AL157702.1-201ENST00000398764 426 ntBASIC5.86□□□□□ -1.47
EPHA3P29320 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHA3P29320 AC096533.1-201ENST00000411645 353 ntBASIC5.86□□□□□ -1.47
EPHA3P29320 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.86□□□□□ -1.47
EPHA3P29320 HMGB3P5-201ENST00000428894 612 ntBASIC5.86□□□□□ -1.47
EPHA3P29320 RPL5P2-201ENST00000429598 854 ntBASIC5.86□□□□□ -1.47
EPHA3P29320 BX119904.1-201ENST00000432026 348 ntBASIC5.86□□□□□ -1.47
EPHA3P29320 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.86□□□□□ -1.47
EPHA3P29320 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.86□□□□□ -1.47
EPHA3P29320 RPL7P33-201ENST00000444159 742 ntBASIC5.86□□□□□ -1.47
EPHA3P29320 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.86□□□□□ -1.47
EPHA3P29320 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHA3P29320 CYCSP20-201ENST00000473154 315 ntBASIC5.86□□□□□ -1.47
EPHA3P29320 AC068587.2-201ENST00000478386 781 ntBASIC5.86□□□□□ -1.47
EPHA3P29320 SUMO1P1-201ENST00000497904 306 ntBASIC5.86□□□□□ -1.47
EPHA3P29320 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.86□□□□□ -1.47
EPHA3P29320 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.86□□□□□ -1.47
EPHA3P29320 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHA3P29320 AC010476.1-201ENST00000519111 851 ntBASIC5.86□□□□□ -1.47
EPHA3P29320 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.86□□□□□ -1.47
EPHA3P29320 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.86□□□□□ -1.47
EPHA3P29320 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.86□□□□□ -1.47
EPHA3P29320 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.86□□□□□ -1.47
EPHA3P29320 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHA3P29320 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
EPHA3P29320 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms