Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
VARSP26640 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.79□□□□□ -1.16
VARSP26640 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.79□□□□□ -1.16
VARSP26640 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC7.79□□□□□ -1.16
VARSP26640 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
VARSP26640 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.78□□□□□ -1.16
VARSP26640 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.78□□□□□ -1.16
VARSP26640 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.78□□□□□ -1.16
VARSP26640 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC7.78□□□□□ -1.16
VARSP26640 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.78□□□□□ -1.16
VARSP26640 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 MTND5P16-201ENST00000460269 1703 ntBASIC7.78□□□□□ -1.16
VARSP26640 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.78□□□□□ -1.16
VARSP26640 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.78□□□□□ -1.16
VARSP26640 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
VARSP26640 Y_RNA.1-201ENST00000352915 104 ntBASIC7.78□□□□□ -1.16
VARSP26640 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 SSX9-201ENST00000376909 591 ntBASIC7.78□□□□□ -1.16
VARSP26640 RNU6-1160P-201ENST00000384546 104 ntBASIC7.78□□□□□ -1.16
VARSP26640 MIR128-2-201ENST00000384893 84 ntBASIC7.78□□□□□ -1.16
VARSP26640 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.78□□□□□ -1.16
VARSP26640 MIR1284-201ENST00000408337 120 ntBASIC7.78□□□□□ -1.16
VARSP26640 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.78□□□□□ -1.16
VARSP26640 JKAMPP1-201ENST00000413804 919 ntBASIC7.78□□□□□ -1.16
VARSP26640 BX295541.1-201ENST00000417774 250 ntBASIC7.78□□□□□ -1.16
VARSP26640 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC7.78□□□□□ -1.16
VARSP26640 OR5P4P-201ENST00000424698 917 ntBASIC7.78□□□□□ -1.16
VARSP26640 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC7.78□□□□□ -1.16
VARSP26640 FCF1P1-201ENST00000432690 571 ntBASIC7.78□□□□□ -1.16
VARSP26640 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.78□□□□□ -1.16
VARSP26640 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC7.78□□□□□ -1.16
VARSP26640 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC7.78□□□□□ -1.16
VARSP26640 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC7.78□□□□□ -1.16
VARSP26640 BX679664.2-201ENST00000439282 283 ntBASIC7.78□□□□□ -1.16
VARSP26640 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC7.78□□□□□ -1.16
VARSP26640 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC7.78□□□□□ -1.16
VARSP26640 ELOBP1-201ENST00000447693 357 ntBASIC7.78□□□□□ -1.16
VARSP26640 AL135929.1-201ENST00000449287 552 ntBASIC7.78□□□□□ -1.16
VARSP26640 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 AL513533.1-201ENST00000453728 415 ntBASIC7.78□□□□□ -1.16
VARSP26640 AC092569.1-201ENST00000455192 258 ntBASIC7.78□□□□□ -1.16
VARSP26640 AC009269.1-202ENST00000484381 469 ntBASIC7.78□□□□□ -1.16
VARSP26640 HMGN2P25-201ENST00000486956 268 ntBASIC7.78□□□□□ -1.16
VARSP26640 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC7.78□□□□□ -1.16
VARSP26640 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC7.78□□□□□ -1.16
VARSP26640 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.78□□□□□ -1.16
VARSP26640 RNU6-1281P-201ENST00000516223 105 ntBASIC7.78□□□□□ -1.16
VARSP26640 RNA5SP287-201ENST00000516358 103 ntBASIC7.78□□□□□ -1.16
VARSP26640 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC7.78□□□□□ -1.16
VARSP26640 AC109635.6-201ENST00000525487 1113 ntBASIC7.78□□□□□ -1.16
VARSP26640 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.78□□□□□ -1.16
VARSP26640 AC233290.2-201ENST00000552852 390 ntBASIC7.78□□□□□ -1.16
VARSP26640 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC7.78□□□□□ -1.16
VARSP26640 MT1L-202ENST00000566367 78 ntBASIC7.78□□□□□ -1.16
VARSP26640 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.78□□□□□ -1.16
VARSP26640 PRR13P4-201ENST00000577786 421 ntBASIC7.78□□□□□ -1.16
VARSP26640 MIR4262-201ENST00000578394 54 ntBASIC7.78□□□□□ -1.16
VARSP26640 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC7.78□□□□□ -1.16
VARSP26640 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 AP004607.9-201ENST00000618202 316 ntBASIC7.78□□□□□ -1.16
VARSP26640 MIR1302-1-201ENST00000637932 143 ntBASIC7.78□□□□□ -1.16
VARSP26640 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
VARSP26640 MTCO1P25-201ENST00000414449 1799 ntBASIC7.78□□□□□ -1.16
VARSP26640 AC009220.2-201ENST00000489759 1751 ntBASIC7.78□□□□□ -1.16
VARSP26640 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.78□□□□□ -1.16
VARSP26640 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
VARSP26640 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 AL591543.1-202ENST00000642095 4149 ntBASIC7.78□□□□□ -1.16
VARSP26640 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARSP26640 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
VARSP26640 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.77□□□□□ -1.16
VARSP26640 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.16
VARSP26640 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
VARSP26640 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
VARSP26640 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.77□□□□□ -1.17
VARSP26640 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
VARSP26640 AC025040.2-201ENST00000558657 1852 ntBASIC7.77□□□□□ -1.17
VARSP26640 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.77□□□□□ -1.17
VARSP26640 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
VARSP26640 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
VARSP26640 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
VARSP26640 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
VARSP26640 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
VARSP26640 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms