Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC087481.2-201ENST00000565492 330 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.93□□□□□ -1.14
RFX1P22670 AC012414.6-201ENST00000568241 401 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AC006116.6-201ENST00000593258 1103 ntBASIC7.93□□□□□ -1.14
RFX1P22670 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC7.93□□□□□ -1.14
RFX1P22670 AC067959.1-201ENST00000604334 379 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AP001596.2-201ENST00000608410 312 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AP005329.3-201ENST00000609924 686 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AC005962.2-201ENST00000611427 652 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AL445670.1-201ENST00000618889 801 ntBASIC7.93□□□□□ -1.14
RFX1P22670 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.93□□□□□ -1.14
RFX1P22670 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.93□□□□□ -1.14
RFX1P22670 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RFX1P22670 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
RFX1P22670 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
RFX1P22670 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC7.93□□□□□ -1.14
RFX1P22670 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
RFX1P22670 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
RFX1P22670 AC138207.6-201ENST00000579164 1967 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AC123769.2-201ENST00000624332 5984 ntBASIC7.93□□□□□ -1.14
RFX1P22670 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RFX1P22670 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
RFX1P22670 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RFX1P22670 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.93□□□□□ -1.14
RFX1P22670 WASF5P-205ENST00000428639 1455 ntBASIC7.93□□□□□ -1.14
RFX1P22670 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RFX1P22670 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RFX1P22670 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.93□□□□□ -1.14
RFX1P22670 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
RFX1P22670 MRRFP1-201ENST00000435941 1675 ntBASIC7.92□□□□□ -1.14
RFX1P22670 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RFX1P22670 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RFX1P22670 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RFX1P22670 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RFX1P22670 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
RFX1P22670 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.92□□□□□ -1.14
RFX1P22670 AC093311.1-201ENST00000506586 2021 ntBASIC7.92□□□□□ -1.14
RFX1P22670 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
RFX1P22670 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RFX1P22670 Y_RNA.18-201ENST00000362461 102 ntBASIC7.92□□□□□ -1.14
RFX1P22670 U3.14-201ENST00000365363 227 ntBASIC7.92□□□□□ -1.14
RFX1P22670 Y_RNA.359-201ENST00000365498 102 ntBASIC7.92□□□□□ -1.14
RFX1P22670 MIR320B1-201ENST00000390209 79 ntBASIC7.92□□□□□ -1.14
RFX1P22670 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
RFX1P22670 RNU6-1320P-201ENST00000390838 107 ntBASIC7.92□□□□□ -1.14
RFX1P22670 RNU6-1269P-201ENST00000391139 107 ntBASIC7.92□□□□□ -1.14
RFX1P22670 SNORA11D-201ENST00000408548 128 ntBASIC7.92□□□□□ -1.14
RFX1P22670 SNORA11E-201ENST00000408778 128 ntBASIC7.92□□□□□ -1.14
RFX1P22670 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.92□□□□□ -1.14
RFX1P22670 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC7.92□□□□□ -1.14
RFX1P22670 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.92□□□□□ -1.14
RFX1P22670 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.92□□□□□ -1.14
RFX1P22670 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC7.92□□□□□ -1.14
RFX1P22670 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC7.92□□□□□ -1.14
RFX1P22670 AL604028.2-201ENST00000437848 788 ntBASIC7.92□□□□□ -1.14
RFX1P22670 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.92□□□□□ -1.14
RFX1P22670 YRDCP3-201ENST00000456507 480 ntBASIC7.92□□□□□ -1.14
RFX1P22670 RNU6-599P-201ENST00000459383 107 ntBASIC7.92□□□□□ -1.14
RFX1P22670 RNU6-1193P-201ENST00000459461 107 ntBASIC7.92□□□□□ -1.14
RFX1P22670 RPL7P41-201ENST00000485823 957 ntBASIC7.92□□□□□ -1.14
RFX1P22670 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC7.92□□□□□ -1.14
RFX1P22670 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.92□□□□□ -1.14
RFX1P22670 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC7.92□□□□□ -1.14
RFX1P22670 AC008496.1-201ENST00000509131 295 ntBASIC7.92□□□□□ -1.14
RFX1P22670 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.92□□□□□ -1.14
RFX1P22670 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC7.92□□□□□ -1.14
RFX1P22670 IGLVI-42-201ENST00000522485 381 ntBASIC7.92□□□□□ -1.14
RFX1P22670 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC7.92□□□□□ -1.14
RFX1P22670 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC7.92□□□□□ -1.14
RFX1P22670 AL139174.1-201ENST00000531489 886 ntBASIC7.92□□□□□ -1.14
RFX1P22670 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.92□□□□□ -1.14
RFX1P22670 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
RFX1P22670 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC7.92□□□□□ -1.14
RFX1P22670 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC7.92□□□□□ -1.14
RFX1P22670 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.92□□□□□ -1.14
RFX1P22670 BPTFP1-201ENST00000579209 492 ntBASIC7.92□□□□□ -1.14
RFX1P22670 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC7.92□□□□□ -1.14
RFX1P22670 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC7.92□□□□□ -1.14
RFX1P22670 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.92□□□□□ -1.14
RFX1P22670 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.92□□□□□ -1.14
RFX1P22670 U6.42-201ENST00000618440 107 ntBASIC7.92□□□□□ -1.14
RFX1P22670 RNU6-368P-201ENST00000620928 107 ntBASIC7.92□□□□□ -1.14
RFX1P22670 RNU6-538P-201ENST00000622329 107 ntBASIC7.92□□□□□ -1.14
RFX1P22670 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.92□□□□□ -1.14
RFX1P22670 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
RFX1P22670 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
RFX1P22670 CASC19-232ENST00000641480 1244 ntBASIC7.92□□□□□ -1.14
RFX1P22670 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RFX1P22670 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RFX1P22670 AC090643.1-201ENST00000623600 3100 ntBASIC7.92□□□□□ -1.14
RFX1P22670 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RFX1P22670 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.92□□□□□ -1.14
RFX1P22670 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.92□□□□□ -1.14
RFX1P22670 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RFX1P22670 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.92□□□□□ -1.14
RFX1P22670 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC7.92□□□□□ -1.14
RFX1P22670 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.92□□□□□ -1.14
RFX1P22670 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RFX1P22670 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
RFX1P22670 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms