Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AL589743.6-201ENST00000611025 117 ntBASIC5.92□□□□□ -1.46
CAPN3P20807 AC119674.1-212ENST00000641155 993 ntBASIC5.92□□□□□ -1.46
CAPN3P20807 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.92□□□□□ -1.46
CAPN3P20807 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
CAPN3P20807 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CAPN3P20807 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CAPN3P20807 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.92□□□□□ -1.46
CAPN3P20807 AC027575.3-201ENST00000583058 2747 ntBASIC5.92□□□□□ -1.46
CAPN3P20807 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CAPN3P20807 FBXL21-201ENST00000297158 1305 ntBASIC5.92□□□□□ -1.46
CAPN3P20807 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CAPN3P20807 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CAPN3P20807 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CAPN3P20807 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CAPN3P20807 AC125336.1-201ENST00000508893 2827 ntBASIC5.92□□□□□ -1.46
CAPN3P20807 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CAPN3P20807 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.92□□□□□ -1.46
CAPN3P20807 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CAPN3P20807 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CAPN3P20807 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.92□□□□□ -1.46
CAPN3P20807 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.92□□□□□ -1.46
CAPN3P20807 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.91□□□□□ -1.46
CAPN3P20807 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.91□□□□□ -1.46
CAPN3P20807 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CAPN3P20807 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.91□□□□□ -1.46
CAPN3P20807 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 RN7SKP275-201ENST00000364626 301 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.91□□□□□ -1.46
CAPN3P20807 RNU6-40P-201ENST00000384254 107 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.91□□□□□ -1.46
CAPN3P20807 RPS7P14-201ENST00000426405 583 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.91□□□□□ -1.46
CAPN3P20807 AL590399.2-201ENST00000427536 309 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.91□□□□□ -1.46
CAPN3P20807 LYPLA1P1-201ENST00000434514 622 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 MTCO3P43-201ENST00000440974 771 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 MORF4-201ENST00000447135 971 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 REG1CP-206ENST00000447469 496 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 H3F3AP5-201ENST00000475267 429 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 CR383656.1-201ENST00000484916 377 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.91□□□□□ -1.46
CAPN3P20807 SUMO1P1-201ENST00000497904 306 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 AC108103.1-201ENST00000511286 446 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.91□□□□□ -1.46
CAPN3P20807 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.91□□□□□ -1.46
CAPN3P20807 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.91□□□□□ -1.46
CAPN3P20807 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.91□□□□□ -1.46
CAPN3P20807 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.91□□□□□ -1.46
CAPN3P20807 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.91□□□□□ -1.46
CAPN3P20807 AC092865.1-201ENST00000544395 1023 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 AC023968.1-201ENST00000560719 475 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 SULT1C2P2-201ENST00000562517 294 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.91□□□□□ -1.46
CAPN3P20807 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.91□□□□□ -1.46
CAPN3P20807 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.91□□□□□ -1.46
CAPN3P20807 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.91□□□□□ -1.46
CAPN3P20807 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.91□□□□□ -1.46
CAPN3P20807 AL031658.2-201ENST00000616850 651 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 AL137067.2-201ENST00000621202 131 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CAPN3P20807 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.91□□□□□ -1.46
CAPN3P20807 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 AC117409.1-201ENST00000470499 1310 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.91□□□□□ -1.46
CAPN3P20807 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.91□□□□□ -1.46
CAPN3P20807 AC015799.1-201ENST00000622996 3122 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
CAPN3P20807 HSPA8P17-201ENST00000427029 1382 ntBASIC5.91□□□□□ -1.46
CAPN3P20807 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CAPN3P20807 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.91□□□□□ -1.46
CAPN3P20807 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CAPN3P20807 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.91□□□□□ -1.46
CAPN3P20807 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.91□□□□□ -1.46
CAPN3P20807 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.91□□□□□ -1.46
CAPN3P20807 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.9□□□□□ -1.46
CAPN3P20807 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.9□□□□□ -1.46
CAPN3P20807 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CAPN3P20807 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
CAPN3P20807 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.9□□□□□ -1.46
CAPN3P20807 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CAPN3P20807 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CAPN3P20807 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CAPN3P20807 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
CAPN3P20807 AC023490.2-201ENST00000359859 470 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms