Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC9.47□□□□□ -0.89
TOP2AP11388 AC122688.1-201ENST00000541494 223 ntBASIC9.47□□□□□ -0.89
TOP2AP11388 GSTP1P1-201ENST00000548078 319 ntBASIC9.47□□□□□ -0.89
TOP2AP11388 AP005432.2-201ENST00000608162 586 ntBASIC9.47□□□□□ -0.89
TOP2AP11388 AL353662.3-201ENST00000625131 237 ntBASIC9.47□□□□□ -0.89
TOP2AP11388 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
TOP2AP11388 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TOP2AP11388 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC9.47□□□□□ -0.89
TOP2AP11388 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
TOP2AP11388 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC9.47□□□□□ -0.89
TOP2AP11388 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TOP2AP11388 RNA5SP123-201ENST00000363244 119 ntBASIC9.46□□□□□ -0.89
TOP2AP11388 MIR141-201ENST00000384975 95 ntBASIC9.46□□□□□ -0.89
TOP2AP11388 AC013442.1-201ENST00000397347 228 ntBASIC9.46□□□□□ -0.89
TOP2AP11388 AC011753.3-201ENST00000443436 406 ntBASIC9.46□□□□□ -0.89
TOP2AP11388 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC9.46□□□□□ -0.89
TOP2AP11388 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
TOP2AP11388 AC009117.1-201ENST00000563948 554 ntBASIC9.46□□□□□ -0.89
TOP2AP11388 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TOP2AP11388 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
TOP2AP11388 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC9.46□□□□□ -0.89
TOP2AP11388 AC022164.1-201ENST00000568767 2673 ntBASIC9.46□□□□□ -0.89
TOP2AP11388 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TOP2AP11388 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC9.46□□□□□ -0.9
TOP2AP11388 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TOP2AP11388 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC9.46□□□□□ -0.9
TOP2AP11388 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
TOP2AP11388 AL035419.1-201ENST00000397037 564 ntBASIC9.46□□□□□ -0.9
TOP2AP11388 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC9.46□□□□□ -0.9
TOP2AP11388 OR10T1P-201ENST00000424327 947 ntBASIC9.46□□□□□ -0.9
TOP2AP11388 AL049745.1-201ENST00000433953 286 ntBASIC9.46□□□□□ -0.9
TOP2AP11388 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC9.46□□□□□ -0.9
TOP2AP11388 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
TOP2AP11388 AC027667.1-201ENST00000545814 304 ntBASIC9.46□□□□□ -0.9
TOP2AP11388 PCNPP1-201ENST00000552501 511 ntBASIC9.46□□□□□ -0.9
TOP2AP11388 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC9.46□□□□□ -0.9
TOP2AP11388 AC234771.5-201ENST00000600161 514 ntBASIC9.46□□□□□ -0.9
TOP2AP11388 MIR378J-201ENST00000611988 109 ntBASIC9.46□□□□□ -0.9
TOP2AP11388 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TOP2AP11388 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
TOP2AP11388 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOP2AP11388 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOP2AP11388 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOP2AP11388 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOP2AP11388 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TOP2AP11388 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
TOP2AP11388 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC9.45□□□□□ -0.9
TOP2AP11388 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOP2AP11388 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
TOP2AP11388 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOP2AP11388 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOP2AP11388 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC9.45□□□□□ -0.9
TOP2AP11388 AC006466.1-201ENST00000438721 289 ntBASIC9.45□□□□□ -0.9
TOP2AP11388 ELOCP3-201ENST00000439303 348 ntBASIC9.45□□□□□ -0.9
TOP2AP11388 RPS4XP20-201ENST00000505751 772 ntBASIC9.45□□□□□ -0.9
TOP2AP11388 GTF2F2P1-201ENST00000511083 675 ntBASIC9.45□□□□□ -0.9
TOP2AP11388 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC9.45□□□□□ -0.9
TOP2AP11388 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOP2AP11388 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOP2AP11388 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOP2AP11388 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOP2AP11388 AC018552.1-201ENST00000562099 811 ntBASIC9.45□□□□□ -0.9
TOP2AP11388 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC9.45□□□□□ -0.9
TOP2AP11388 MIR3934-201ENST00000579806 107 ntBASIC9.45□□□□□ -0.9
TOP2AP11388 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC9.45□□□□□ -0.9
TOP2AP11388 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOP2AP11388 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC9.45□□□□□ -0.9
TOP2AP11388 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TOP2AP11388 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
TOP2AP11388 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TOP2AP11388 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TOP2AP11388 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC9.44□□□□□ -0.9
TOP2AP11388 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
TOP2AP11388 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TOP2AP11388 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
TOP2AP11388 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TOP2AP11388 HNRNPA1P54-201ENST00000411857 9714 ntBASIC9.44□□□□□ -0.9
TOP2AP11388 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC9.44□□□□□ -0.9
TOP2AP11388 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TOP2AP11388 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC9.44□□□□□ -0.9
TOP2AP11388 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC9.44□□□□□ -0.9
TOP2AP11388 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TOP2AP11388 COX6B1P1-201ENST00000415962 213 ntBASIC9.44□□□□□ -0.9
TOP2AP11388 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC9.44□□□□□ -0.9
TOP2AP11388 SNORD125-201ENST00000459538 96 ntBASIC9.44□□□□□ -0.9
TOP2AP11388 DUBR-205ENST00000495228 411 ntTSL 2 BASIC9.44□□□□□ -0.9
TOP2AP11388 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC9.44□□□□□ -0.9
TOP2AP11388 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC9.44□□□□□ -0.9
TOP2AP11388 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC9.44□□□□□ -0.9
TOP2AP11388 PDCD6IPP2-207ENST00000566321 1069 ntBASIC9.44□□□□□ -0.9
TOP2AP11388 AL353729.2-201ENST00000605859 1249 ntBASIC9.44□□□□□ -0.9
TOP2AP11388 AC099494.2-201ENST00000623371 978 ntBASIC9.44□□□□□ -0.9
TOP2AP11388 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TOP2AP11388 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TOP2AP11388 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TOP2AP11388 AC068870.1-201ENST00000563737 2455 ntBASIC9.44□□□□□ -0.9
TOP2AP11388 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
TOP2AP11388 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC9.43□□□□□ -0.9
TOP2AP11388 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
TOP2AP11388 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms