Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AP003115.1-201ENST00000569849 463 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 MTCO2P22-201ENST00000603246 681 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AC010738.1-201ENST00000604970 987 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AC009135.2-201ENST00000624136 1768 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AKAP17BP-201ENST00000431706 2719 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 Z97989.1-201ENST00000531702 2421 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 ZNF736P9Y-201ENST00000439586 1345 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AC092451.3-201ENST00000625067 1343 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 ECM1P2-201ENST00000503354 1577 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 MTND4P29-201ENST00000503122 1372 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 COX6B1P3-201ENST00000312310 260 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 PPCS-201ENST00000372556 984 ntTSL 2 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 RPL7P27-201ENST00000403775 720 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 HMGB1P49-201ENST00000418882 569 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 SETP20-201ENST00000457046 852 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AC011352.2-201ENST00000514574 1016 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 COX6B1P4-201ENST00000519826 484 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 HMGB1P1-201ENST00000522557 636 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 MTND2P26-201ENST00000528255 1029 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 PCNPP1-201ENST00000552501 511 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AL162632.2-201ENST00000553933 399 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 ULK4P1-202ENST00000565174 503 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 MIR4789-201ENST00000577469 82 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AL049840.5-201ENST00000602827 552 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AP000254.1-201ENST00000609934 520 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 IGKV2OR2-10-201ENST00000613976 311 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AL096712.1-201ENST00000614561 159 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AC103706.2-201ENST00000638080 240 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AC099654.10-201ENST00000640395 161 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AC005614.1-201ENST00000598952 3653 ntBASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8.79□□□□□ -1
CSB-PGBD3P0DP91 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.78□□□□□ -1
CSB-PGBD3P0DP91 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CSB-PGBD3P0DP91 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC8.78□□□□□ -1
CSB-PGBD3P0DP91 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.78□□□□□ -1
CSB-PGBD3P0DP91 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
CSB-PGBD3P0DP91 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
CSB-PGBD3P0DP91 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.78□□□□□ -1
CSB-PGBD3P0DP91 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC8.78□□□□□ -1
CSB-PGBD3P0DP91 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
CSB-PGBD3P0DP91 AL353743.3-201ENST00000442109 1468 ntBASIC8.78□□□□□ -1
CSB-PGBD3P0DP91 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
CSB-PGBD3P0DP91 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.78□□□□□ -1
CSB-PGBD3P0DP91 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.78□□□□□ -1
CSB-PGBD3P0DP91 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC8.78□□□□□ -1
CSB-PGBD3P0DP91 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.78□□□□□ -1
CSB-PGBD3P0DP91 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms