Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC3.37□□□□□ -1.87
PKHD1P08F94 CBFA2T2-206ENST00000397800 7449 ntTSL 5 BASIC3.37□□□□□ -1.87
PKHD1P08F94 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
PKHD1P08F94 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PKHD1P08F94 ZNF608-201ENST00000306315 5958 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
PKHD1P08F94 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC3.37□□□□□ -1.87
PKHD1P08F94 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 GPS2P1-201ENST00000411761 986 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.37□□□□□ -1.87
PKHD1P08F94 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 RPS17P2-201ENST00000461663 408 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 OR52A4P-201ENST00000472867 958 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.37□□□□□ -1.87
PKHD1P08F94 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.37□□□□□ -1.87
PKHD1P08F94 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC3.37□□□□□ -1.87
PKHD1P08F94 AC024941.1-201ENST00000612250 334 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC3.37□□□□□ -1.87
PKHD1P08F94 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PKHD1P08F94 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 EFHC1-201ENST00000371068 6987 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 AC007614.5-201ENST00000623424 8892 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 NCAM1-222ENST00000615285 6045 ntTSL 5 BASIC3.37□□□□□ -1.87
PKHD1P08F94 AL137100.1-201ENST00000556703 1620 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PKHD1P08F94 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PKHD1P08F94 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 RNA5SP171-201ENST00000391071 115 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 GAPDHP15-201ENST00000398586 975 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC3.37□□□□□ -1.87
PKHD1P08F94 HSPD1P12-201ENST00000429127 1069 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC3.37□□□□□ -1.87
PKHD1P08F94 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC3.37□□□□□ -1.87
PKHD1P08F94 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.37□□□□□ -1.87
PKHD1P08F94 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC3.37□□□□□ -1.87
PKHD1P08F94 IGKV2D-10-201ENST00000520194 281 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.37□□□□□ -1.87
PKHD1P08F94 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 AC133555.2-201ENST00000550213 292 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.37□□□□□ -1.87
PKHD1P08F94 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 AL355596.1-201ENST00000565399 3996 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PKHD1P08F94 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC3.37□□□□□ -1.87
PKHD1P08F94 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC3.37□□□□□ -1.87
PKHD1P08F94 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC3.37□□□□□ -1.87
PKHD1P08F94 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC3.37□□□□□ -1.87
PKHD1P08F94 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 CASKP1-201ENST00000412870 582 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 RPL21P108-201ENST00000413857 481 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 AC004074.1-201ENST00000421810 1063 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC3.37□□□□□ -1.87
PKHD1P08F94 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
PKHD1P08F94 AC006130.2-201ENST00000586202 326 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 AC079414.3-201ENST00000612986 1090 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 AP003789.1-201ENST00000617737 605 ntBASIC3.37□□□□□ -1.87
PKHD1P08F94 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC3.37□□□□□ -1.87
PKHD1P08F94 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PKHD1P08F94 RGPD2-201ENST00000398146 6931 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PKHD1P08F94 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC3.36□□□□□ -1.87
PKHD1P08F94 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PKHD1P08F94 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC3.36□□□□□ -1.87
PKHD1P08F94 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKHD1P08F94 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC3.36□□□□□ -1.87
PKHD1P08F94 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC3.36□□□□□ -1.87
PKHD1P08F94 AC119751.6-201ENST00000416712 186 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 RAD23BP1-201ENST00000421404 1227 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.36□□□□□ -1.87
PKHD1P08F94 TMEM183AP1-205ENST00000432739 290 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC3.36□□□□□ -1.87
PKHD1P08F94 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PKHD1P08F94 SNORA84-201ENST00000459229 133 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 TRBV5-2-201ENST00000489095 273 ntBASIC3.36□□□□□ -1.87
PKHD1P08F94 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC3.36□□□□□ -1.87
PKHD1P08F94 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC3.36□□□□□ -1.87
PKHD1P08F94 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms