Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RN7SL722P-201ENST00000617780 284 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 RN7SL565P-201ENST00000618246 284 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.19□□□□□ -1.58
SPTA1P02549 AC132068.1-201ENST00000623805 459 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SPTA1P02549 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.19□□□□□ -1.58
SPTA1P02549 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SPTA1P02549 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.19□□□□□ -1.58
SPTA1P02549 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SPTA1P02549 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SPTA1P02549 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC5.19□□□□□ -1.58
SPTA1P02549 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.19□□□□□ -1.58
SPTA1P02549 AC104964.3-201ENST00000606115 2860 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.19□□□□□ -1.58
SPTA1P02549 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SPTA1P02549 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SPTA1P02549 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SPTA1P02549 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SPTA1P02549 FAM32BP-201ENST00000344033 333 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 RN7SKP227-201ENST00000364445 330 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SPTA1P02549 AC096775.1-201ENST00000437724 448 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SPTA1P02549 AC020910.2-201ENST00000603635 610 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 AL133406.3-201ENST00000606817 541 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SPTA1P02549 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.19□□□□□ -1.58
SPTA1P02549 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.19□□□□□ -1.58
SPTA1P02549 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.19□□□□□ -1.58
SPTA1P02549 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SPTA1P02549 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.19□□□□□ -1.58
SPTA1P02549 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SPTA1P02549 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SPTA1P02549 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SPTA1P02549 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SPTA1P02549 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SPTA1P02549 AC009831.5-201ENST00000624000 3189 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SPTA1P02549 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SPTA1P02549 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SPTA1P02549 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SPTA1P02549 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SPTA1P02549 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SPTA1P02549 NPM1P40-201ENST00000412758 733 ntBASIC5.18□□□□□ -1.58
SPTA1P02549 AL133173.1-201ENST00000423458 397 ntBASIC5.18□□□□□ -1.58
SPTA1P02549 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.18□□□□□ -1.58
SPTA1P02549 AC022034.3-201ENST00000471393 478 ntBASIC5.18□□□□□ -1.58
SPTA1P02549 RPS18P6-201ENST00000476880 458 ntBASIC5.18□□□□□ -1.58
SPTA1P02549 RNU6-941P-201ENST00000516346 108 ntBASIC5.18□□□□□ -1.58
SPTA1P02549 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.18□□□□□ -1.58
SPTA1P02549 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.18□□□□□ -1.58
SPTA1P02549 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC5.18□□□□□ -1.58
SPTA1P02549 CYP4F35P-202ENST00000636121 390 ntBASIC5.18□□□□□ -1.58
SPTA1P02549 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SPTA1P02549 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SPTA1P02549 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SPTA1P02549 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.18□□□□□ -1.58
SPTA1P02549 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SPTA1P02549 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.18□□□□□ -1.58
SPTA1P02549 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.18□□□□□ -1.58
SPTA1P02549 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.18□□□□□ -1.58
SPTA1P02549 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SPTA1P02549 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.18□□□□□ -1.58
SPTA1P02549 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
SPTA1P02549 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SPTA1P02549 USP48-203ENST00000374732 3037 ntTSL 2 BASIC5.18□□□□□ -1.58
SPTA1P02549 RNA5SP319-201ENST00000362768 119 ntBASIC5.18□□□□□ -1.58
SPTA1P02549 AL360271.1-201ENST00000395679 510 ntBASIC5.18□□□□□ -1.58
SPTA1P02549 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.18□□□□□ -1.58
SPTA1P02549 AL591848.1-201ENST00000413092 322 ntBASIC5.18□□□□□ -1.58
SPTA1P02549 AL360081.1-201ENST00000428299 555 ntBASIC5.18□□□□□ -1.58
SPTA1P02549 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.18□□□□□ -1.58
SPTA1P02549 AC008897.1-201ENST00000494006 347 ntBASIC5.18□□□□□ -1.58
SPTA1P02549 SSX8-201ENST00000506270 579 ntBASIC5.18□□□□□ -1.58
SPTA1P02549 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.18□□□□□ -1.58
SPTA1P02549 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.18□□□□□ -1.58
SPTA1P02549 AC135068.12-201ENST00000637370 931 ntBASIC5.18□□□□□ -1.58
SPTA1P02549 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SPTA1P02549 HSPA8P18-201ENST00000439846 1928 ntBASIC5.18□□□□□ -1.58
SPTA1P02549 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC5.18□□□□□ -1.58
SPTA1P02549 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.18□□□□□ -1.58
SPTA1P02549 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.18□□□□□ -1.58
SPTA1P02549 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SPTA1P02549 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SPTA1P02549 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SPTA1P02549 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.17□□□□□ -1.58
SPTA1P02549 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SPTA1P02549 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SPTA1P02549 AL159987.1-201ENST00000347911 293 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.17□□□□□ -1.58
SPTA1P02549 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.17□□□□□ -1.58
SPTA1P02549 OR2AM1P-201ENST00000422137 422 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 AC104837.2-201ENST00000427236 424 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 AL022237.1-201ENST00000446663 358 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.17□□□□□ -1.58
SPTA1P02549 AL035090.1-201ENST00000454835 332 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.17□□□□□ -1.58
SPTA1P02549 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.17□□□□□ -1.58
SPTA1P02549 AL049872.1-201ENST00000556323 322 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms