Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 CYCSP24-201ENST00000445119 316 ntBASIC4.81□□□□□ -1.64
HLA-DQB1P01920 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 PPIAP7-201ENST00000454070 489 ntBASIC4.81□□□□□ -1.64
HLA-DQB1P01920 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 RN7SL273P-201ENST00000481561 299 ntBASIC4.81□□□□□ -1.64
HLA-DQB1P01920 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.81□□□□□ -1.64
HLA-DQB1P01920 RN7SL346P-201ENST00000491561 294 ntBASIC4.81□□□□□ -1.64
HLA-DQB1P01920 IGBP1P4-201ENST00000503202 879 ntBASIC4.81□□□□□ -1.64
HLA-DQB1P01920 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 AC074255.1-201ENST00000511259 501 ntBASIC4.81□□□□□ -1.64
HLA-DQB1P01920 AC139365.2-201ENST00000517972 253 ntBASIC4.81□□□□□ -1.64
HLA-DQB1P01920 AP000620.1-201ENST00000527147 504 ntBASIC4.81□□□□□ -1.64
HLA-DQB1P01920 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 AC022106.2-201ENST00000620114 757 ntBASIC4.81□□□□□ -1.64
HLA-DQB1P01920 AC007204.1-201ENST00000621794 555 ntBASIC4.81□□□□□ -1.64
HLA-DQB1P01920 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 AL034549.2-201ENST00000618285 3373 ntBASIC4.81□□□□□ -1.64
HLA-DQB1P01920 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQB1P01920 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AL162456.1-201ENST00000634535 2006 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AC090220.1-201ENST00000593078 1699 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AC144833.1-201ENST00000567953 4089 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AC004817.4-201ENST00000602396 3625 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 SNORD56.6-201ENST00000384569 71 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 NIFKP3-201ENST00000417799 865 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AC012519.1-201ENST00000424588 610 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AC092865.3-201ENST00000425390 1026 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 KCTD9P1-201ENST00000430462 1167 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AL596266.1-201ENST00000448132 400 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 RPS12P31-201ENST00000491419 398 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AC108103.1-201ENST00000511286 446 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 LDHBP3-201ENST00000514909 822 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AC138938.1-201ENST00000515431 782 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 TRIM51DP-201ENST00000529746 596 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AC092681.3-201ENST00000609463 678 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AL135999.3-201ENST00000610501 812 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 TET1P1-201ENST00000426627 2301 ntBASIC4.8□□□□□ -1.64
HLA-DQB1P01920 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DQB1P01920 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AL096711.1-201ENST00000404780 554 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AC016739.1-201ENST00000405359 345 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms