Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
RNF40O75150 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
RNF40O75150 KAT14-206ENST00000489634 3152 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.48□□□□□ -1.05
RNF40O75150 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.48□□□□□ -1.05
RNF40O75150 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC8.48□□□□□ -1.05
RNF40O75150 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.48□□□□□ -1.05
RNF40O75150 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC8.48□□□□□ -1.05
RNF40O75150 SNORD42.2-201ENST00000365570 69 ntBASIC8.48□□□□□ -1.05
RNF40O75150 SNORD86-201ENST00000391196 86 ntBASIC8.48□□□□□ -1.05
RNF40O75150 AC096664.1-201ENST00000393996 778 ntBASIC8.48□□□□□ -1.05
RNF40O75150 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC8.48□□□□□ -1.05
RNF40O75150 AC093698.1-201ENST00000423843 571 ntBASIC8.48□□□□□ -1.05
RNF40O75150 FAM96AP1-201ENST00000430879 482 ntBASIC8.48□□□□□ -1.05
RNF40O75150 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC8.48□□□□□ -1.05
RNF40O75150 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC8.48□□□□□ -1.05
RNF40O75150 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC8.48□□□□□ -1.05
RNF40O75150 AC005002.1-201ENST00000447458 540 ntBASIC8.48□□□□□ -1.05
RNF40O75150 ELOBP1-201ENST00000447693 357 ntBASIC8.48□□□□□ -1.05
RNF40O75150 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC8.48□□□□□ -1.05
RNF40O75150 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC8.48□□□□□ -1.05
RNF40O75150 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC8.48□□□□□ -1.05
RNF40O75150 RNU7-157P-201ENST00000459600 66 ntBASIC8.48□□□□□ -1.05
RNF40O75150 PSAT1P4-201ENST00000466500 526 ntBASIC8.48□□□□□ -1.05
RNF40O75150 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 H3F3AP5-201ENST00000475267 429 ntBASIC8.48□□□□□ -1.05
RNF40O75150 RPL7AP56-201ENST00000476420 791 ntBASIC8.48□□□□□ -1.05
RNF40O75150 RPL23AP37-201ENST00000479658 549 ntBASIC8.48□□□□□ -1.05
RNF40O75150 AC016687.1-201ENST00000482574 353 ntBASIC8.48□□□□□ -1.05
RNF40O75150 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC8.48□□□□□ -1.05
RNF40O75150 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC8.48□□□□□ -1.05
RNF40O75150 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC8.48□□□□□ -1.05
RNF40O75150 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
RNF40O75150 AC243972.3-201ENST00000539655 198 ntBASIC8.48□□□□□ -1.05
RNF40O75150 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC8.48□□□□□ -1.05
RNF40O75150 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC8.48□□□□□ -1.05
RNF40O75150 AC233290.2-201ENST00000552852 390 ntBASIC8.48□□□□□ -1.05
RNF40O75150 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC8.48□□□□□ -1.05
RNF40O75150 AC015818.5-201ENST00000578659 356 ntBASIC8.48□□□□□ -1.05
RNF40O75150 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC8.48□□□□□ -1.05
RNF40O75150 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC8.48□□□□□ -1.05
RNF40O75150 DTNA-220ENST00000590831 847 ntTSL 2 BASIC8.48□□□□□ -1.05
RNF40O75150 AC008638.3-201ENST00000603341 463 ntBASIC8.48□□□□□ -1.05
RNF40O75150 AC004853.1-201ENST00000604902 698 ntBASIC8.48□□□□□ -1.05
RNF40O75150 AC113139.1-201ENST00000605049 239 ntBASIC8.48□□□□□ -1.05
RNF40O75150 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC8.48□□□□□ -1.05
RNF40O75150 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC8.48□□□□□ -1.05
RNF40O75150 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC8.48□□□□□ -1.05
RNF40O75150 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC8.48□□□□□ -1.05
RNF40O75150 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
RNF40O75150 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
RNF40O75150 DDX11L16-201ENST00000507418 1306 ntBASIC8.48□□□□□ -1.05
RNF40O75150 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RNF40O75150 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC8.48□□□□□ -1.05
RNF40O75150 AC245505.2-201ENST00000553572 3055 ntBASIC8.48□□□□□ -1.05
RNF40O75150 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC8.47□□□□□ -1.05
RNF40O75150 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC8.47□□□□□ -1.05
RNF40O75150 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC8.47□□□□□ -1.05
RNF40O75150 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC8.47□□□□□ -1.05
RNF40O75150 RNY3P3-201ENST00000363816 102 ntBASIC8.47□□□□□ -1.05
RNF40O75150 Y_RNA.474-201ENST00000384341 102 ntBASIC8.47□□□□□ -1.05
RNF40O75150 RPS3AP3-201ENST00000411933 242 ntBASIC8.47□□□□□ -1.05
RNF40O75150 AC127526.2-201ENST00000426436 775 ntBASIC8.47□□□□□ -1.05
RNF40O75150 PRPS1P2-201ENST00000430496 937 ntBASIC8.47□□□□□ -1.05
RNF40O75150 FECHP1-201ENST00000431896 1214 ntBASIC8.47□□□□□ -1.05
RNF40O75150 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC8.47□□□□□ -1.05
RNF40O75150 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC8.47□□□□□ -1.05
RNF40O75150 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC8.47□□□□□ -1.05
RNF40O75150 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms