Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHOX2O60902 RPL7P56-201ENST00000429441 717 ntBASIC5.62□□□□□ -1.51
SHOX2O60902 KCTD9P1-201ENST00000430462 1167 ntBASIC5.62□□□□□ -1.51
SHOX2O60902 CLUHP1-201ENST00000435012 1190 ntBASIC5.62□□□□□ -1.51
SHOX2O60902 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.62□□□□□ -1.51
SHOX2O60902 OR2L9P-201ENST00000444456 913 ntBASIC5.62□□□□□ -1.51
SHOX2O60902 AC092601.1-201ENST00000444526 383 ntBASIC5.62□□□□□ -1.51
SHOX2O60902 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHOX2O60902 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHOX2O60902 IGBP1P3-201ENST00000447449 1000 ntBASIC5.62□□□□□ -1.51
SHOX2O60902 AL034369.1-201ENST00000453808 477 ntBASIC5.62□□□□□ -1.51
SHOX2O60902 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SHOX2O60902 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHOX2O60902 RN7SL214P-201ENST00000487317 265 ntBASIC5.62□□□□□ -1.51
SHOX2O60902 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHOX2O60902 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.62□□□□□ -1.51
SHOX2O60902 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.62□□□□□ -1.51
SHOX2O60902 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.62□□□□□ -1.51
SHOX2O60902 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHOX2O60902 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.62□□□□□ -1.51
SHOX2O60902 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.62□□□□□ -1.51
SHOX2O60902 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.62□□□□□ -1.51
SHOX2O60902 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.62□□□□□ -1.51
SHOX2O60902 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.62□□□□□ -1.51
SHOX2O60902 AL359091.2-201ENST00000609303 556 ntBASIC5.62□□□□□ -1.51
SHOX2O60902 MIR6861-201ENST00000618657 64 ntBASIC5.62□□□□□ -1.51
SHOX2O60902 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.62□□□□□ -1.51
SHOX2O60902 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.62□□□□□ -1.51
SHOX2O60902 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHOX2O60902 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.62□□□□□ -1.51
SHOX2O60902 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.62□□□□□ -1.51
SHOX2O60902 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHOX2O60902 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHOX2O60902 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHOX2O60902 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHOX2O60902 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHOX2O60902 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHOX2O60902 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHOX2O60902 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SHOX2O60902 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
SHOX2O60902 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.61□□□□□ -1.51
SHOX2O60902 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHOX2O60902 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.61□□□□□ -1.51
SHOX2O60902 AC019205.1-201ENST00000421830 730 ntBASIC5.61□□□□□ -1.51
SHOX2O60902 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.61□□□□□ -1.51
SHOX2O60902 GAPDHP48-201ENST00000436626 961 ntBASIC5.61□□□□□ -1.51
SHOX2O60902 BTF3P6-201ENST00000448054 499 ntBASIC5.61□□□□□ -1.51
SHOX2O60902 PPIAP32-201ENST00000449940 472 ntBASIC5.61□□□□□ -1.51
SHOX2O60902 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.61□□□□□ -1.51
SHOX2O60902 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.61□□□□□ -1.51
SHOX2O60902 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.61□□□□□ -1.51
SHOX2O60902 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.61□□□□□ -1.51
SHOX2O60902 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.61□□□□□ -1.51
SHOX2O60902 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.61□□□□□ -1.51
SHOX2O60902 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.61□□□□□ -1.51
SHOX2O60902 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.61□□□□□ -1.51
SHOX2O60902 TRIM51DP-201ENST00000529746 596 ntBASIC5.61□□□□□ -1.51
SHOX2O60902 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHOX2O60902 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
SHOX2O60902 SETP1-201ENST00000556014 845 ntBASIC5.61□□□□□ -1.51
SHOX2O60902 AC091078.2-201ENST00000557145 559 ntBASIC5.61□□□□□ -1.51
SHOX2O60902 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SHOX2O60902 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.61□□□□□ -1.51
SHOX2O60902 AGGF1P7-201ENST00000562369 913 ntBASIC5.61□□□□□ -1.51
SHOX2O60902 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.61□□□□□ -1.51
SHOX2O60902 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.61□□□□□ -1.51
SHOX2O60902 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.61□□□□□ -1.51
SHOX2O60902 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.61□□□□□ -1.51
SHOX2O60902 AC090220.1-201ENST00000593078 1699 ntBASIC5.61□□□□□ -1.51
SHOX2O60902 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHOX2O60902 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.61□□□□□ -1.51
SHOX2O60902 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.61□□□□□ -1.51
SHOX2O60902 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHOX2O60902 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.61□□□□□ -1.51
SHOX2O60902 AC003973.3-201ENST00000624863 2822 ntBASIC5.61□□□□□ -1.51
SHOX2O60902 OR11H2-202ENST00000641517 1085 ntBASIC5.61□□□□□ -1.51
SHOX2O60902 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHOX2O60902 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.61□□□□□ -1.51
SHOX2O60902 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHOX2O60902 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
SHOX2O60902 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHOX2O60902 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SHOX2O60902 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.6□□□□□ -1.51
SHOX2O60902 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.6□□□□□ -1.51
SHOX2O60902 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHOX2O60902 PSG10P-201ENST00000501199 1500 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SHOX2O60902 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHOX2O60902 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHOX2O60902 SMG1P7-201ENST00000565246 2704 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 RNA5SP435-201ENST00000364044 108 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SHOX2O60902 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SHOX2O60902 RN7SKP144-201ENST00000411108 279 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 AC007738.1-201ENST00000413892 348 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.6□□□□□ -1.51
SHOX2O60902 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.6□□□□□ -1.51
SHOX2O60902 AC130360.1-201ENST00000425489 1117 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHOX2O60902 OR2AH1P-201ENST00000425717 928 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms