Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 UBFD1P1-201ENST00000473259 814 ntBASIC3.8□□□□□ -1.8
NDUFA1O15239 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC3.8□□□□□ -1.8
NDUFA1O15239 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NDUFA1O15239 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDUFA1O15239 AC112484.3-201ENST00000505910 329 ntBASIC3.8□□□□□ -1.8
NDUFA1O15239 NACAP5-201ENST00000509863 636 ntBASIC3.8□□□□□ -1.8
NDUFA1O15239 SCARNA18.1-201ENST00000516330 83 ntBASIC3.8□□□□□ -1.8
NDUFA1O15239 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC3.8□□□□□ -1.8
NDUFA1O15239 FTH1P11-201ENST00000517577 551 ntBASIC3.8□□□□□ -1.8
NDUFA1O15239 OR5AM1P-201ENST00000532136 1032 ntBASIC3.8□□□□□ -1.8
NDUFA1O15239 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NDUFA1O15239 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC3.8□□□□□ -1.8
NDUFA1O15239 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC3.8□□□□□ -1.8
NDUFA1O15239 AC103968.1-201ENST00000557841 573 ntBASIC3.8□□□□□ -1.8
NDUFA1O15239 AGGF1P7-201ENST00000562369 913 ntBASIC3.8□□□□□ -1.8
NDUFA1O15239 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC3.8□□□□□ -1.8
NDUFA1O15239 PRPF19P1-201ENST00000584766 898 ntBASIC3.8□□□□□ -1.8
NDUFA1O15239 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
NDUFA1O15239 MIR6823-201ENST00000622118 61 ntBASIC3.8□□□□□ -1.8
NDUFA1O15239 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC3.8□□□□□ -1.8
NDUFA1O15239 AC103703.1-201ENST00000634783 663 ntBASIC3.8□□□□□ -1.8
NDUFA1O15239 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC3.8□□□□□ -1.8
NDUFA1O15239 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDUFA1O15239 AP002833.3-201ENST00000625075 2265 ntBASIC3.8□□□□□ -1.8
NDUFA1O15239 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NDUFA1O15239 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDUFA1O15239 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.8□□□□□ -1.8
NDUFA1O15239 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
NDUFA1O15239 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
NDUFA1O15239 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDUFA1O15239 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NDUFA1O15239 CASC19-238ENST00000641523 1558 ntBASIC3.8□□□□□ -1.8
NDUFA1O15239 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NDUFA1O15239 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDUFA1O15239 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NDUFA1O15239 AC027088.4-201ENST00000611559 1947 ntBASIC3.8□□□□□ -1.8
NDUFA1O15239 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NDUFA1O15239 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC3.79□□□□□ -1.8
NDUFA1O15239 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDUFA1O15239 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.79□□□□□ -1.8
NDUFA1O15239 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDUFA1O15239 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NDUFA1O15239 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NDUFA1O15239 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDUFA1O15239 RNA5SP110-201ENST00000362638 115 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 RN7SKP77-201ENST00000363261 353 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 RN7SKP250-201ENST00000363924 321 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 OR1L6-202ENST00000373684 1044 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NDUFA1O15239 NPM1P40-201ENST00000412758 733 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 RPL35AP3-201ENST00000414680 288 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC3.79□□□□□ -1.8
NDUFA1O15239 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC3.79□□□□□ -1.8
NDUFA1O15239 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC3.79□□□□□ -1.8
NDUFA1O15239 RPL19P16-201ENST00000433839 588 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC3.79□□□□□ -1.8
NDUFA1O15239 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC3.79□□□□□ -1.8
NDUFA1O15239 GEMIN2P1-201ENST00000454246 752 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC3.79□□□□□ -1.8
NDUFA1O15239 AC245028.2-201ENST00000458673 253 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 RN7SL269P-201ENST00000467795 305 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 AL122020.1-201ENST00000472287 459 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 AC044810.1-201ENST00000480271 711 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 RN7SL57P-201ENST00000493687 290 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC3.79□□□□□ -1.8
NDUFA1O15239 AC091912.1-201ENST00000511351 248 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC3.79□□□□□ -1.8
NDUFA1O15239 RNU6-513P-201ENST00000516104 104 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 RN7SKP253-201ENST00000516424 309 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 CDC42P3-201ENST00000518493 633 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NDUFA1O15239 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NDUFA1O15239 OR4A41P-201ENST00000533053 928 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC3.79□□□□□ -1.8
NDUFA1O15239 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC3.79□□□□□ -1.8
NDUFA1O15239 AC006349.1-201ENST00000555526 235 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC3.79□□□□□ -1.8
NDUFA1O15239 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC3.79□□□□□ -1.8
NDUFA1O15239 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC3.79□□□□□ -1.8
NDUFA1O15239 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NDUFA1O15239 MIR4776-2-201ENST00000580204 80 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC3.79□□□□□ -1.8
NDUFA1O15239 APOC2-205ENST00000592257 444 ntTSL 3 BASIC3.79□□□□□ -1.8
NDUFA1O15239 AC068768.2-201ENST00000602352 343 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 AC005479.3-201ENST00000602790 431 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 FAM27E4-201ENST00000605259 342 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 AC005828.7-201ENST00000607331 556 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC3.79□□□□□ -1.8
NDUFA1O15239 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NDUFA1O15239 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NDUFA1O15239 uc_338.31-201ENST00000615595 186 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC3.79□□□□□ -1.8
NDUFA1O15239 OR11H2-202ENST00000641517 1085 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
NDUFA1O15239 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDUFA1O15239 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDUFA1O15239 TCP1P3-201ENST00000414406 1498 ntBASIC3.79□□□□□ -1.8
NDUFA1O15239 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC3.79□□□□□ -1.8
NDUFA1O15239 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms