Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 GSTM5P1-201ENST00000434751 660 ntBASIC6.94□□□□□ -1.3
RGPD3A6NKT7 AL590399.4-201ENST00000436561 601 ntBASIC6.94□□□□□ -1.3
RGPD3A6NKT7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 RBMY2TP-201ENST00000451162 947 ntBASIC6.94□□□□□ -1.3
RGPD3A6NKT7 RN7SL354P-201ENST00000469282 294 ntBASIC6.94□□□□□ -1.3
RGPD3A6NKT7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 MIR4675-201ENST00000577898 77 ntBASIC6.94□□□□□ -1.3
RGPD3A6NKT7 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 MT-RNR2-201ENST00000387347 1559 ntBASIC6.94□□□□□ -1.3
RGPD3A6NKT7 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RGPD3A6NKT7 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 KNOP1P3-201ENST00000446933 426 ntBASIC6.93□□□□□ -1.3
RGPD3A6NKT7 RNA5SP373-201ENST00000517271 95 ntBASIC6.93□□□□□ -1.3
RGPD3A6NKT7 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 AC114876.1-201ENST00000490962 1366 ntBASIC6.93□□□□□ -1.3
RGPD3A6NKT7 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
RGPD3A6NKT7 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 DBIP1-201ENST00000401435 260 ntBASIC6.92□□□□□ -1.3
RGPD3A6NKT7 GTF2IP2-201ENST00000424290 697 ntBASIC6.92□□□□□ -1.3
RGPD3A6NKT7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 PMS2P3-207ENST00000529061 717 ntBASIC6.92□□□□□ -1.3
RGPD3A6NKT7 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 AC005341.1-201ENST00000571086 708 ntBASIC6.92□□□□□ -1.3
RGPD3A6NKT7 AC067852.5-201ENST00000589299 310 ntBASIC6.92□□□□□ -1.3
RGPD3A6NKT7 AC137695.1-201ENST00000604126 489 ntBASIC6.92□□□□□ -1.3
RGPD3A6NKT7 AC009597.2-201ENST00000604659 592 ntBASIC6.92□□□□□ -1.3
RGPD3A6NKT7 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 AC104162.1-201ENST00000430831 2382 ntBASIC6.92□□□□□ -1.3
RGPD3A6NKT7 BRD7P6-201ENST00000431406 1860 ntBASIC6.92□□□□□ -1.3
RGPD3A6NKT7 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 RPL10P10-201ENST00000403509 664 ntBASIC6.92□□□□□ -1.3
RGPD3A6NKT7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.92□□□□□ -1.3
RGPD3A6NKT7 RN7SKP100-201ENST00000411258 284 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms