Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 MTCO1P31-201ENST00000506355 492 ntBASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 AC090958.1-201ENST00000511122 351 ntBASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 RNU5A-7P-201ENST00000515979 116 ntBASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 RNA5SP434-201ENST00000516647 121 ntBASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 TRIM77BP-201ENST00000524985 1119 ntBASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 AL445435.1-201ENST00000604232 665 ntBASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 U1.25-201ENST00000614085 162 ntBASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 U1.34-201ENST00000618578 162 ntBASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 U1.31-201ENST00000620022 160 ntBASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 AC024884.1-201ENST00000620583 399 ntBASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 ZNF101P1-201ENST00000435701 1720 ntBASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.13□□□□□ -1.27
PTPDC1A2A3K4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AF228730.1-201ENST00000397972 663 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AL132875.1-201ENST00000403623 949 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 PTCD2P2-201ENST00000415579 1095 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 VN1R31P-201ENST00000417498 730 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 ARL2BPP3-201ENST00000421226 480 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 STRADBP1-201ENST00000478954 1281 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 RPS3AP15-201ENST00000483874 781 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AC105233.1-201ENST00000498840 781 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AK4P6-201ENST00000505168 528 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AC025458.1-201ENST00000506046 166 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 CR383658.1-201ENST00000514609 734 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 RNA5SP340-201ENST00000517132 107 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 TPM3P3-201ENST00000521343 354 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 OR56A7P-201ENST00000524865 941 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AC093014.1-201ENST00000548926 724 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AC068768.2-201ENST00000602352 343 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AC108865.2-201ENST00000606881 432 ntBASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PTPDC1A2A3K4 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PTPDC1A2A3K4 MTCO1P28-201ENST00000574177 1528 ntBASIC7.11□□□□□ -1.27
PTPDC1A2A3K4 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
PTPDC1A2A3K4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PTPDC1A2A3K4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PTPDC1A2A3K4 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
PTPDC1A2A3K4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PTPDC1A2A3K4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
PTPDC1A2A3K4 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.11□□□□□ -1.27
PTPDC1A2A3K4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.11□□□□□ -1.27
PTPDC1A2A3K4 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PTPDC1A2A3K4 SNORA70.9-201ENST00000384370 135 ntBASIC7.11□□□□□ -1.27
PTPDC1A2A3K4 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PTPDC1A2A3K4 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC7.11□□□□□ -1.27
PTPDC1A2A3K4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms