Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RN7SL193P-201ENST00000491708 276 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 RN7SL57P-201ENST00000493687 290 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 AC025458.1-201ENST00000506046 166 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 RNU6-513P-201ENST00000516104 104 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 AC027026.1-201ENST00000532323 742 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 PCNAP4-201ENST00000532690 730 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 AC091078.2-201ENST00000557145 559 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 AC090826.1-203ENST00000569235 490 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 LINC00556-201ENST00000569603 412 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 AL513327.3-201ENST00000602618 469 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 NANOGP3-201ENST00000605855 286 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 AC073869.7-201ENST00000640874 297 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 MRRFP1-201ENST00000435941 1675 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 TCP1P3-201ENST00000414406 1498 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AC117409.1-201ENST00000470499 1310 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AL137058.3-201ENST00000624531 3099 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 RNU2-18P-201ENST00000411224 162 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AC004129.2-201ENST00000457229 287 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 RPL37P23-201ENST00000492641 294 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AC105384.2-201ENST00000508433 640 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AC027369.2-201ENST00000528030 440 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 TOMM20P1-201ENST00000534518 427 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AL356801.1-201ENST00000559320 294 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 MIR4260-201ENST00000583107 67 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AL133481.2-203ENST00000607558 139 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 Z95327.3-201ENST00000610385 572 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 OR11H2-202ENST00000641517 1085 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 PROS2P-201ENST00000474651 1951 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AP004607.3-201ENST00000530354 3915 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DRB4X5D2U9 AC093849.1-201ENST00000563631 2209 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms