Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AC005244.1-201ENST00000582566 339 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AL359091.2-201ENST00000609303 556 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AL158062.1-201ENST00000619632 745 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 QRSL1P1-201ENST00000400977 1540 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 PARP4P2-201ENST00000446672 3326 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 COX6B1P3-201ENST00000312310 260 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 RNFT1P3-201ENST00000340898 1052 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 ADAM24P-201ENST00000398655 2101 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 CLNS1AP1-201ENST00000435954 682 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 MTND2P40-201ENST00000436718 841 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AL138787.1-202ENST00000437804 898 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC023141.8-201ENST00000442554 208 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC118758.1-202ENST00000454719 225 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC023194.2-201ENST00000465398 406 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC005165.2-201ENST00000466070 380 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AL157777.1-201ENST00000468100 304 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 RBBP4P1-201ENST00000502424 1276 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 LDHAP1-201ENST00000509421 992 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC097486.1-201ENST00000515331 210 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 RPA2P1-201ENST00000556557 721 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC145423.1-201ENST00000605712 336 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AP001437.1-201ENST00000608783 456 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 MIR6809-201ENST00000612189 116 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AL139099.4-201ENST00000614802 114 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AL122125.1-201ENST00000616999 600 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC245014.3-201ENST00000618589 347 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC005618.4-201ENST00000625053 554 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 OR11H2-202ENST00000641517 1085 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 MRRFP1-201ENST00000435941 1675 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AC093775.1-201ENST00000624154 1868 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 RLIMP2-201ENST00000427891 1563 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 AP004607.3-201ENST00000530354 3915 ntBASIC5.04□□□□□ -1.6
RHBDD3Q9Y3P4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.03□□□□□ -1.6
RHBDD3Q9Y3P4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.03□□□□□ -1.6
RHBDD3Q9Y3P4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
RHBDD3Q9Y3P4 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.03□□□□□ -1.6
RHBDD3Q9Y3P4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
RHBDD3Q9Y3P4 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.03□□□□□ -1.6
RHBDD3Q9Y3P4 RNU1-65P-201ENST00000363919 148 ntBASIC5.03□□□□□ -1.6
RHBDD3Q9Y3P4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RHBDD3Q9Y3P4 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms