Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 RBMY3AP-201ENST00000449381 1145 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 SNORD42A-201ENST00000459584 64 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 ALG13-214ENST00000482742 620 ntTSL 2 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC019235.1-201ENST00000503847 207 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 RNU6-1308P-201ENST00000516817 103 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 OR4N1P-201ENST00000554847 949 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC092868.1-201ENST00000557949 802 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC026470.2-201ENST00000561492 181 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC099676.1-201ENST00000608886 657 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC244100.4-201ENST00000617747 388 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC073348.1-201ENST00000623002 331 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC104964.2-201ENST00000562242 4641 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC130360.2-201ENST00000533477 1556 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 MFSD8-227ENST00000641393 4069 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC117529.2-201ENST00000512159 2068 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CUEDC1Q9NWM3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.52□□□□□ -1.2
CUEDC1Q9NWM3 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CUEDC1Q9NWM3 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.52□□□□□ -1.2
CUEDC1Q9NWM3 AC105749.1-201ENST00000631338 2008 ntBASIC7.52□□□□□ -1.2
CUEDC1Q9NWM3 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC7.52□□□□□ -1.2
CUEDC1Q9NWM3 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.52□□□□□ -1.2
CUEDC1Q9NWM3 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC011592.1-201ENST00000624647 3634 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 Y_RNA.431-201ENST00000384086 102 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC093719.1-202ENST00000392735 373 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC009237.2-201ENST00000421358 284 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC066692.1-201ENST00000421721 457 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AL353729.1-201ENST00000425044 720 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 HBBP1-201ENST00000433329 439 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC239860.1-201ENST00000444680 1270 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 RPL7P14-201ENST00000449851 741 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 HMGB1P5-202ENST00000451497 985 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC007547.2-201ENST00000468802 360 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 RPL7P17-201ENST00000470927 724 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AP004607.5-201ENST00000532034 217 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 OR7K1P-201ENST00000546439 926 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC004825.1-201ENST00000555068 586 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 MRPS21P9-201ENST00000571150 257 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms