Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
TREX1Q9NSU2 AL137141.1-201ENST00000624622 4836 ntBASIC5.59□□□□□ -1.51
TREX1Q9NSU2 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TREX1Q9NSU2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.59□□□□□ -1.51
TREX1Q9NSU2 SRRM1P3-201ENST00000426911 2678 ntBASIC5.59□□□□□ -1.52
TREX1Q9NSU2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.59□□□□□ -1.52
TREX1Q9NSU2 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
TREX1Q9NSU2 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TREX1Q9NSU2 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.59□□□□□ -1.52
TREX1Q9NSU2 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
TREX1Q9NSU2 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 RPSAP35-201ENST00000413753 818 ntBASIC5.58□□□□□ -1.52
TREX1Q9NSU2 AL133482.1-201ENST00000415988 498 ntBASIC5.58□□□□□ -1.52
TREX1Q9NSU2 RPL24P2-201ENST00000421023 475 ntBASIC5.58□□□□□ -1.52
TREX1Q9NSU2 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 AC115283.1-201ENST00000427353 400 ntBASIC5.58□□□□□ -1.52
TREX1Q9NSU2 RPL7P56-201ENST00000429441 717 ntBASIC5.58□□□□□ -1.52
TREX1Q9NSU2 HMGN1P2-201ENST00000445197 310 ntBASIC5.58□□□□□ -1.52
TREX1Q9NSU2 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 NPM1P21-201ENST00000513394 762 ntBASIC5.58□□□□□ -1.52
TREX1Q9NSU2 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 AL359715.3-201ENST00000569267 2123 ntBASIC5.58□□□□□ -1.52
TREX1Q9NSU2 H3F3BP2-201ENST00000583907 357 ntBASIC5.58□□□□□ -1.52
TREX1Q9NSU2 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 AC027243.2-201ENST00000602530 724 ntBASIC5.58□□□□□ -1.52
TREX1Q9NSU2 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 OR13C1P-202ENST00000641378 2919 ntBASIC5.58□□□□□ -1.52
TREX1Q9NSU2 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TREX1Q9NSU2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AC106872.5-201ENST00000508856 1416 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AC079097.1-201ENST00000512187 1399 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 SLC20A1P1-201ENST00000413906 956 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AC093155.2-201ENST00000420734 937 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AC113412.1-201ENST00000425840 504 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 RPS27AP6-201ENST00000427962 448 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AL359265.1-201ENST00000440296 795 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AC073465.2-201ENST00000440938 498 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AC005297.1-201ENST00000444765 862 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 IGBP1P3-201ENST00000447449 1000 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AL445665.1-202ENST00000452436 324 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 UBFD1P1-201ENST00000473259 814 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 RN7SL583P-201ENST00000475692 287 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 PFN1P8-201ENST00000497012 543 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AC091912.1-201ENST00000511351 248 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 RN7SKP70-201ENST00000516655 271 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AC079064.1-201ENST00000528365 362 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 NPM1P5-201ENST00000557228 838 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AC079315.1-201ENST00000602952 623 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AL096712.1-201ENST00000614561 159 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AC016542.2-201ENST00000624201 619 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AL390318.1-201ENST00000624564 687 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms