Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 ZNF658B-201ENST00000602828 3408 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 RPL24P4-201ENST00000326586 421 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 RNU6-413P-201ENST00000384115 107 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 RNU6-98P-201ENST00000384173 107 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 SNORA70.8-201ENST00000384231 136 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 RNU6-83P-201ENST00000384568 112 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 SNORA40.2-201ENST00000390847 128 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AL034417.1-201ENST00000399343 800 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 EEF1GP6-201ENST00000402309 905 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 RN7SKP254-201ENST00000410685 310 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AL008629.1-201ENST00000438615 184 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 CYCSP44-201ENST00000448560 313 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 RANP1-206ENST00000455094 651 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 ATG12P2-201ENST00000456830 416 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC115223.1-201ENST00000466377 870 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC091959.2-201ENST00000477363 321 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC111193.1-201ENST00000504097 155 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC113347.3-201ENST00000509113 148 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 NACAP6-201ENST00000509572 622 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 OR5H7P-201ENST00000514084 930 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 RNU5A-4P-201ENST00000516588 111 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC087752.2-201ENST00000521219 281 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC084337.1-201ENST00000524809 686 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 ACTG1P15-201ENST00000570019 1063 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 RPSAP66-201ENST00000592196 606 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AP001542.2-201ENST00000593141 364 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC021749.1-201ENST00000604322 607 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC090525.3-201ENST00000605601 189 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AL031777.2-201ENST00000611953 196 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 MIR6889-201ENST00000613185 59 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC005277.2-201ENST00000617898 390 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC131159.1-201ENST00000621854 213 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AL512506.2-201ENST00000624472 458 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC135068.11-201ENST00000636378 921 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 MIR1322-201ENST00000638013 71 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC068137.4-201ENST00000638485 296 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 AC138393.1-206ENST00000540997 1886 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 BX284613.1-201ENST00000452221 1641 ntBASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
TRIM55Q9BYV6 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 NSRP1P1-201ENST00000444067 1693 ntBASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 AL355377.1-201ENST00000621125 1653 ntBASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 OR10D1P-201ENST00000355343 936 ntBASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 RN7SKP184-201ENST00000362348 333 ntBASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 SNORD113-6-201ENST00000363345 75 ntBASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 AL445238.1-204ENST00000400311 463 ntBASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 AL079342.2-201ENST00000403367 482 ntBASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.82□□□□□ -1.32
TRIM55Q9BYV6 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms