Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 AL391261.1-201ENST00000555712 1479 ntBASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 MCTP1-201ENST00000312216 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL25A1Q9BXS0 MAGEE2-201ENST00000373359 2249 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 ERCC5-202ENST00000375954 2986 ntTSL 5 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 STT3A-201ENST00000392708 4558 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC104447.1-201ENST00000624214 2124 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 SORBS1-201ENST00000277982 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 RNU6-877P-201ENST00000383868 107 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 MIR105-2-201ENST00000385083 81 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 RPL23AP39-201ENST00000415533 405 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 VDAC1P10-201ENST00000416715 891 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC069157.1-201ENST00000421749 137 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC099782.1-201ENST00000425889 474 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC108479.1-201ENST00000431142 427 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 CYCSP42-201ENST00000450823 238 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 OR6C5P-201ENST00000452388 923 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC015820.1-201ENST00000473882 321 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC104108.1-201ENST00000509930 412 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 MTND1P35-201ENST00000526739 508 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC012254.4-201ENST00000588843 273 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC008737.2-201ENST00000599446 118 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AL109918.3-201ENST00000603072 338 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AL035413.2-201ENST00000604801 525 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AL590282.1-201ENST00000610379 1136 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC105429.2-201ENST00000610567 517 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC005514.1-201ENST00000623521 208 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 MIR3662-201ENST00000637030 95 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC117529.2-201ENST00000512159 2068 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 NXF4-202ENST00000416098 1465 ntBASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 AL049543.1-201ENST00000499525 2874 ntTSL 2 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 CCR1-201ENST00000296140 2731 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 CHN2-211ENST00000424025 2279 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL25A1Q9BXS0 HRH2-204ENST00000636584 4067 ntTSL 3 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 DLGAP5-201ENST00000247191 2973 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 MAPK10-357ENST00000641831 2858 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 ERMAP-202ENST00000372514 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AC091046.3-201ENST00000631455 1574 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 ZRANB2-202ENST00000370920 3078 ntAPPRIS P4 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 HHAT-204ENST00000413764 3575 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 Y_RNA.133-201ENST00000363428 110 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 Y_RNA.146-201ENST00000363549 102 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 RN7SKP162-201ENST00000363605 345 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 SNORA74A-201ENST00000364089 198 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 RN7SKP189-201ENST00000365042 330 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 Y_RNA.459-201ENST00000384251 102 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 RNU4-70P-201ENST00000384579 139 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms