Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 Y_RNA.395-201ENST00000383945 109 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 CISD1P1-201ENST00000393907 327 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 PSMA6P1-201ENST00000400275 741 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 RPS20P2-201ENST00000402520 389 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 AL137784.1-201ENST00000407121 745 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 AL139805.1-201ENST00000407837 289 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 MIR1296-201ENST00000408136 92 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 RN7SKP136-201ENST00000410927 300 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 OR13D3P-201ENST00000412501 937 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 SRIP2-201ENST00000428470 166 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 AC006335.2-201ENST00000437993 330 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 AL136380.1-201ENST00000447970 162 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 AC093166.3-201ENST00000448785 303 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 TRGVB-201ENST00000453257 471 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 MED28P7-201ENST00000456611 530 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 AC104164.4-201ENST00000483456 493 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 AC006499.2-201ENST00000513470 337 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 AC034102.1-201ENST00000552016 604 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 MKNK2-211ENST00000591142 875 ntTSL 2 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 LINC02018-202ENST00000608707 445 ntTSL 3 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 TCL6-207ENST00000483087 2194 ntTSL 2 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
USB1Q9BQ65 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 AC117382.2-201ENST00000564748 3151 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USB1Q9BQ65 AC016251.1-201ENST00000624299 4198 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
USB1Q9BQ65 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USB1Q9BQ65 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 NBPF14-205ENST00000614329 2051 ntTSL 5 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 NBPF26-205ENST00000615219 2051 ntTSL 5 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 NBPF14-207ENST00000616120 2051 ntTSL 5 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 NBPF12-207ENST00000617864 2051 ntTSL 5 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 ANKRD26P2-201ENST00000445530 1710 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USB1Q9BQ65 AL450992.1-201ENST00000432386 4109 ntTSL 2 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USB1Q9BQ65 AC046144.1-201ENST00000478559 1853 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 KCNK2-201ENST00000391894 1491 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 ZNF207-204ENST00000394673 2124 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 FLT1-203ENST00000540678 1927 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 Y_RNA.231-201ENST00000364358 102 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 RNU6-532P-201ENST00000384318 107 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 SNORA14B-201ENST00000384452 135 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 MIR506-201ENST00000384998 124 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 RPL23AP32-201ENST00000395315 459 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 MRPL42P2-201ENST00000403169 426 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 AL136968.2-201ENST00000407959 354 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 RN7SKP154-201ENST00000410136 290 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 RN7SKP225-201ENST00000410405 352 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 RNA5SP221-201ENST00000411271 103 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 AL590094.1-203ENST00000435649 828 ntTSL 5 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 AC239367.1-201ENST00000439389 936 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 AC092431.2-201ENST00000441658 318 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 MEMO1P4-201ENST00000453590 386 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 RNU6-1208P-201ENST00000459588 107 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 AC112719.1-201ENST00000477971 315 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 GAPDHP22-201ENST00000491037 413 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 NPM1P41-201ENST00000512920 831 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms