Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 VN1R21P-201ENST00000426703 765 ntBASIC9.07□□□□□ -0.96
IFT140Q96RY7 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC9.07□□□□□ -0.96
IFT140Q96RY7 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC9.07□□□□□ -0.96
IFT140Q96RY7 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
IFT140Q96RY7 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC9.07□□□□□ -0.96
IFT140Q96RY7 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC9.07□□□□□ -0.96
IFT140Q96RY7 AP006289.1-201ENST00000538089 277 ntBASIC9.07□□□□□ -0.96
IFT140Q96RY7 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
IFT140Q96RY7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
IFT140Q96RY7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
IFT140Q96RY7 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
IFT140Q96RY7 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
IFT140Q96RY7 IRF5P1-201ENST00000504852 2164 ntBASIC9.07□□□□□ -0.96
IFT140Q96RY7 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
IFT140Q96RY7 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
IFT140Q96RY7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
IFT140Q96RY7 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
IFT140Q96RY7 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 AL590399.4-201ENST00000436561 601 ntBASIC9.06□□□□□ -0.96
IFT140Q96RY7 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 AC011742.2-201ENST00000443818 352 ntBASIC9.06□□□□□ -0.96
IFT140Q96RY7 AC026979.1-201ENST00000492525 396 ntBASIC9.06□□□□□ -0.96
IFT140Q96RY7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 AC005341.1-201ENST00000571086 708 ntBASIC9.06□□□□□ -0.96
IFT140Q96RY7 SS18L2P2-201ENST00000583960 235 ntBASIC9.06□□□□□ -0.96
IFT140Q96RY7 AL356752.1-201ENST00000615844 593 ntBASIC9.06□□□□□ -0.96
IFT140Q96RY7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 AP003789.1-201ENST00000617737 605 ntBASIC9.06□□□□□ -0.96
IFT140Q96RY7 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
IFT140Q96RY7 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
IFT140Q96RY7 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
IFT140Q96RY7 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC9.06□□□□□ -0.96
IFT140Q96RY7 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
IFT140Q96RY7 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
IFT140Q96RY7 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
IFT140Q96RY7 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
IFT140Q96RY7 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
IFT140Q96RY7 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
IFT140Q96RY7 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC9.05□□□□□ -0.96
IFT140Q96RY7 RPL32P3-201ENST00000359025 275 ntBASIC9.05□□□□□ -0.96
IFT140Q96RY7 Y_RNA.126-201ENST00000363382 111 ntBASIC9.05□□□□□ -0.96
IFT140Q96RY7 GAPDHP15-201ENST00000398586 975 ntBASIC9.05□□□□□ -0.96
IFT140Q96RY7 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC9.05□□□□□ -0.96
IFT140Q96RY7 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC9.05□□□□□ -0.96
IFT140Q96RY7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC9.05□□□□□ -0.96
IFT140Q96RY7 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC9.05□□□□□ -0.96
IFT140Q96RY7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC9.05□□□□□ -0.96
IFT140Q96RY7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
IFT140Q96RY7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
IFT140Q96RY7 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
IFT140Q96RY7 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC9.05□□□□□ -0.96
IFT140Q96RY7 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
IFT140Q96RY7 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
IFT140Q96RY7 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
IFT140Q96RY7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
IFT140Q96RY7 NCOA4P3-201ENST00000513203 1877 ntBASIC9.05□□□□□ -0.96
IFT140Q96RY7 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC9.04□□□□□ -0.96
IFT140Q96RY7 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
IFT140Q96RY7 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
IFT140Q96RY7 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
IFT140Q96RY7 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
IFT140Q96RY7 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
IFT140Q96RY7 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
IFT140Q96RY7 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
IFT140Q96RY7 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC9.04□□□□□ -0.96
IFT140Q96RY7 RNA5SP91-201ENST00000390902 119 ntBASIC9.04□□□□□ -0.96
IFT140Q96RY7 EI24P4-201ENST00000423683 1078 ntBASIC9.04□□□□□ -0.96
IFT140Q96RY7 NDUFA5P8-201ENST00000449019 346 ntBASIC9.04□□□□□ -0.96
IFT140Q96RY7 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC9.04□□□□□ -0.96
IFT140Q96RY7 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC9.04□□□□□ -0.96
IFT140Q96RY7 PMS2P3-207ENST00000529061 717 ntBASIC9.04□□□□□ -0.96
IFT140Q96RY7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC9.04□□□□□ -0.96
IFT140Q96RY7 AC018558.5-201ENST00000565840 952 ntBASIC9.04□□□□□ -0.96
IFT140Q96RY7 AC015660.5-201ENST00000623238 564 ntBASIC9.04□□□□□ -0.96
IFT140Q96RY7 AC114876.1-201ENST00000490962 1366 ntBASIC9.04□□□□□ -0.96
IFT140Q96RY7 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
IFT140Q96RY7 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
IFT140Q96RY7 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
IFT140Q96RY7 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC9.04□□□□□ -0.96
IFT140Q96RY7 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
IFT140Q96RY7 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
IFT140Q96RY7 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
IFT140Q96RY7 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
IFT140Q96RY7 AC007996.1-201ENST00000620414 2821 ntBASIC9.04□□□□□ -0.96
IFT140Q96RY7 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC9.03□□□□□ -0.96
IFT140Q96RY7 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC9.03□□□□□ -0.96
IFT140Q96RY7 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC9.03□□□□□ -0.96
IFT140Q96RY7 AL009179.1-201ENST00000406085 265 ntBASIC9.03□□□□□ -0.96
IFT140Q96RY7 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms