Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 AC007842.1-201ENST00000597336 2039 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 KARSP1-201ENST00000451871 1752 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 OR13C1P-202ENST00000641378 2919 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 SNORA17A-201ENST00000391185 133 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 AL121977.1-201ENST00000401636 979 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 RMRPP5-201ENST00000411156 267 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 VN1R21P-201ENST00000426703 765 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 SUMO2P3-201ENST00000438311 288 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 RSU1P1-201ENST00000453416 441 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 MEMO1P4-201ENST00000453590 386 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 AC108751.3-201ENST00000461814 1020 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 RNU6-615P-201ENST00000516065 106 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 IGLVIV-64-201ENST00000518581 301 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 AC135626.1-201ENST00000556983 435 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 DPPA2P4-201ENST00000563717 878 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 AL133481.2-203ENST00000607558 139 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 SNORA17.5-201ENST00000630429 132 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 AC008691.1-209ENST00000642094 814 ntBASIC5.91□□□□□ -1.46
RPRD1AQ96P16 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RPRD1AQ96P16 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 AC020633.1-201ENST00000468439 2247 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 RNA5SP435-201ENST00000364044 108 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 MIR130A-201ENST00000385274 89 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 TRAV35-201ENST00000390462 330 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 RNA5SP178-201ENST00000410380 128 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 SDHDP6-201ENST00000414693 480 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 AL161722.1-201ENST00000446972 1032 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 YWHAEP1-201ENST00000453697 763 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 DUTP1-201ENST00000493631 470 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 SNORA43.3-201ENST00000517240 103 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 AC020937.1-201ENST00000519677 1013 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 IGKV3D-34-201ENST00000522638 302 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 IGBP1P1-201ENST00000554337 1009 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 AC010547.6-201ENST00000571789 193 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 RN7SL787P-201ENST00000613000 284 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 AC126175.1-201ENST00000617041 758 ntBASIC5.9□□□□□ -1.46
RPRD1AQ96P16 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.9□□□□□ -1.46
RPRD1AQ96P16 CDY11P-201ENST00000447168 1651 ntBASIC5.9□□□□□ -1.47
RPRD1AQ96P16 MRE11P1-201ENST00000464884 2127 ntBASIC5.9□□□□□ -1.47
RPRD1AQ96P16 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RPRD1AQ96P16 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
RPRD1AQ96P16 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
RPRD1AQ96P16 AP000473.2-201ENST00000602659 1537 ntBASIC5.89□□□□□ -1.47
RPRD1AQ96P16 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RPRD1AQ96P16 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.89□□□□□ -1.47
RPRD1AQ96P16 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
RPRD1AQ96P16 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RPRD1AQ96P16 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RPRD1AQ96P16 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms