Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC092794.1-201ENST00000612734 582 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC026951.2-201ENST00000613847 241 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC015540.1-201ENST00000615828 501 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC073968.1-201ENST00000618594 637 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC092159.4-201ENST00000624944 550 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 LINC01808-202ENST00000641680 1116 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 OR52B5P-204ENST00000641744 3467 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 RNU6-353P-201ENST00000364266 108 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 RNU6-549P-201ENST00000384433 107 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 Y_RNA.560-201ENST00000384689 102 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC007068.1-201ENST00000396690 844 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 SLC9B1P2-201ENST00000398120 1184 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AL132875.1-201ENST00000403623 949 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AL133325.1-201ENST00000421090 382 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC012519.1-201ENST00000424588 610 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 DSTNP5-201ENST00000427921 523 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AP000936.2-201ENST00000447151 681 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 RNU7-140P-201ENST00000459546 60 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 RPL35AP19-201ENST00000469425 329 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 OR7E157P-201ENST00000494376 911 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC084024.2-201ENST00000503480 791 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 RNU6-720P-201ENST00000516363 108 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 RNA5SP278-201ENST00000517055 102 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 snoZ278.1-201ENST00000517059 112 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AP005902.2-201ENST00000518393 307 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 IGKV2D-38-201ENST00000518423 240 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 MTCYBP41-201ENST00000528913 1123 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC092851.1-201ENST00000535964 478 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AGGF1P8-201ENST00000562979 1000 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 RN7SL32P-201ENST00000580514 281 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC087575.1-201ENST00000585087 229 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC020914.7-201ENST00000594477 545 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC073544.2-201ENST00000601155 540 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC012065.3-201ENST00000602736 439 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC073648.5-201ENST00000603502 305 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC022001.1-201ENST00000605193 268 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms